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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98327 Canola golgi, vacuole 31.26 96.02
CDY70160 Canola vacuole 63.55 89.91
CDX88594 Canola golgi, vacuole 26.07 61.85
CDY34975 Canola golgi, plasma membrane, vacuole 63.16 61.8
CDY28339 Canola vacuole 63.16 61.8
CDX67790 Canola vacuole 62.78 59.39
Os06t0628500-00 Rice extracellular, golgi, vacuole 22.05 57.82
CDX76255 Canola extracellular 9.6 57.81
CDX93659 Canola vacuole 60.83 57.34
HORVU2Hr1G057440.2 Barley vacuole 37.87 55.73
AT1G31740.1 Thale cress vacuole 55.9 55.33
CDY65885 Canola vacuole 56.42 52.98
Bra003128.1-P Field mustard extracellular, vacuole 47.47 51.77
CDY32304 Canola cytosol 59.01 51.59
GSMUA_Achr4P25980_001 Banana extracellular, golgi, vacuole 40.21 50.08
CDY53917 Canola plastid 66.15 49.56
CDY69031 Canola cytosol, plastid, vacuole 39.04 48.47
GSMUA_Achr4P26030_001 Banana cytosol, peroxisome, vacuole 33.2 48.3
Solyc07g042220.1.1 Tomato unclear 47.34 44.62
PGSC0003DMT400059880 Potato cytosol 43.71 43.77
KRH19351 Soybean extracellular, golgi, vacuole 46.43 43.29
VIT_11s0016g00680.t01 Wine grape vacuole 46.56 42.99
GSMUA_Achr5P11870_001 Banana extracellular, golgi 42.02 41.27
KRH02579 Soybean extracellular, golgi, vacuole 44.75 40.88
CDX95380 Canola vacuole 34.63 36.73
CDX94367 Canola mitochondrion 33.85 36.66
CDY11899 Canola golgi, vacuole 34.24 36.57
CDY36028 Canola plastid 33.72 36.52
GSMUA_Achr2P21790_001 Banana golgi, vacuole 39.82 36.5
CDX92753 Canola golgi, vacuole 33.59 36.38
CDY53959 Canola golgi, vacuole 33.98 35.89
CDY42755 Canola vacuole 33.07 35.81
CDY47949 Canola golgi, vacuole 33.85 35.75
GSMUA_Achr5P11850_001 Banana extracellular, golgi 41.63 35.75
CDY20708 Canola golgi, vacuole 33.33 35.6
CDY32919 Canola golgi, vacuole 33.33 35.6
HORVU1Hr1G003210.2 Barley golgi, vacuole 38.0 35.43
Os10t0330600-01 Rice extracellular 38.0 35.39
TraesCS1A01G024100.1 Wheat vacuole 38.0 35.39
Zm00001d043393_P001 Maize extracellular 37.61 35.28
HORVU1Hr1G003200.1 Barley golgi, vacuole 37.87 35.18
TraesCS1D01G024200.1 Wheat vacuole 37.74 35.1
EES03081 Sorghum extracellular 37.61 34.94
TraesCS1B01G030400.1 Wheat vacuole 37.61 34.9
Os10t0340600-01 Rice extracellular, golgi, vacuole 37.22 34.66
CDY43757 Canola golgi, vacuole 32.56 33.87
CDX84446 Canola golgi, vacuole 32.17 33.47
CDY15749 Canola golgi, vacuole 36.58 33.41
CDY39845 Canola vacuole 31.0 33.19
CDX89360 Canola mitochondrion 30.09 33.19
CDY04567 Canola golgi, vacuole 36.32 32.94
CDX97513 Canola golgi, vacuole 35.8 32.86
CDX84445 Canola vacuole 30.61 32.78
CDY23637 Canola golgi, vacuole 35.67 32.78
CDY31204 Canola golgi, vacuole 35.8 32.7
CDX83288 Canola golgi, vacuole 35.8 32.66
CDY37486 Canola golgi, vacuole 35.41 32.54
CDY51738 Canola golgi, vacuole 35.28 32.42
CDY31349 Canola vacuole 30.87 32.12
CDX76254 Canola golgi, nucleus, vacuole 24.25 31.8
CDX75569 Canola golgi, vacuole 33.46 31.2
CDX69219 Canola vacuole 33.07 30.95
CDY59693 Canola vacuole 33.46 30.14
CDY19166 Canola golgi, vacuole 32.56 28.27
CDY23785 Canola vacuole 32.56 28.11
CDX75479 Canola vacuole 30.35 27.69
CDX69103 Canola vacuole 30.09 27.49
CDX72512 Canola vacuole 29.31 26.78
CDY40650 Canola vacuole 29.18 26.66
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 26.46 26.15
CDX72747 Canola vacuole 28.4 24.72
CDY43756 Canola cytosol, nucleus, peroxisome 15.82 23.92
CDY22419 Canola cytosol 28.92 23.33
CDY02241 Canola golgi, vacuole 28.66 22.35
CDX89744 Canola vacuole 28.53 20.26
CDY70594 Canola cytosol 9.73 18.03
CDY69471 Canola cytosol 9.73 18.03
CDY70118 Canola cytosol 13.75 17.85
CDY59691 Canola cytosol, nucleus, vacuole 1.95 4.26
CDY59725 Canola cytosol 1.69 4.17
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23MapMan:21.3.2.2.2
Gene3D:3.20.20.80GO:A0A078BXR5EnsemblPlants:CDX67763ProteinID:CDX67763ProteinID:CDX67763.1GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00098951001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SF
InterPro:IPR008979PFAM:PF01301PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF88
MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EE5EECSEG:seg
Description
BnaA07g18030D
Coordinates
chrLK031787:+:2126672..2137316
Molecular Weight (calculated)
87768.4 Da
IEP (calculated)
7.113
GRAVY (calculated)
-0.425
Length
771 amino acids
Sequence
(BLAST)
001: MVSLRFLLFF LFVSSVYATI VSHDGRAITI DGHRRVLLSG SIHYPRSTPE MWPDLIKKGK EGGLDAIETY VFWNAHEPTR RQYDFSGKLD LIRFLKTIQD
101: EGLYGVLRIG PYACAEWNYG GFPVWLHNMP GMVFRTTNKA YMDEMQNFTT MIVDMVKKEK LFASQGGPII LAQIENEYGN VMGPYGESGK AYIKWCANMA
201: QSLDVGVPWI MCQQNDAPQP MLNTCNGFYC DNFVPNNPNT PKMWTENWTG WFKQWGGKNP HRTTEDELLI IIICSVYATI VSHDGRAITI DGHRRVLLSG
301: SIHYPRSTPE MWPDLIKKSK EGGLDAIETY VFWNAHEPTR RQYDFSGKLD LIRFLKTIQN EGLYAVLRIG PYACAEWNYG GFPVWLHNMP GMVFRTTNKA
401: YMDEMQNFTT MIVDMVKKEK LFASQGGPII LAQIENEYGN VMGPYGESGK AYIKWCANMA QSLDVGVPWI MCQQNDAPQP MLNTCNGFYC DNFVPNNPNT
501: PKMWTENWTG WFKQWGGKNP HRTTEDVAFS VARFFQRGGT FNNYYMYHGG TNFDRTAGGP YITTSYDYDA PLDEYGNLSQ PKYGHLKQLH DVLHTIEKTL
601: TYGNISTIDF GNSASATIYK TEEGSSCFFG NGNENSDATI SFQGESYVVP AWSVTILPDC KKEAYNTAKI TTQTSMMVKK PNEAEDTPST LKWSWRPENM
701: DNFLLKGKGE STQTQLFDQK VVTNDQSDYL WYMTTVKFKK RDPLLGKTMS LRVNSTAHVL HAFVNGKNIG K
Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)
001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC
Arabidopsis Description
BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.