CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	98.48	75.0
Bra001991.1-P	Field mustard	golgi, vacuole	93.6	68.47
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	88.38	61.91
CDX72512	Canola	vacuole	84.51	59.48
CDY40650	Canola	vacuole	84.34	59.36
CDX69103	Canola	vacuole	84.01	59.12
CDX75479	Canola	vacuole	83.84	58.93
CDY02241	Canola	golgi, vacuole	86.87	52.17
CDX89744	Canola	vacuole	87.37	47.79
CDX72747	Canola	vacuole	64.65	43.34
CDY43756	Canola	cytosol, nucleus, peroxisome	35.02	40.78
CDY22419	Canola	cytosol	64.81	40.27
KRH24309	Soybean	golgi, vacuole	55.72	39.26
HORVU7Hr1G009630.2	Barley	cytosol	45.29	39.04
KRH29286	Soybean	extracellular, golgi, vacuole	54.88	38.72
PGSC0003DMT400031178	Potato	vacuole	53.37	38.24
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	51.68	37.95
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	52.86	37.7
Solyc01g111540.2.1	Tomato	unclear	52.53	37.55
Solyc10g055470.1.1	Tomato	vacuole	52.36	37.52
KRH60700	Soybean	extracellular, golgi, vacuole	52.36	36.85
GSMUA_AchrUn_...	Banana	extracellular, vacuole	50.34	36.64
GSMUA_Achr1P26480_001	Banana	vacuole	49.83	36.41
GSMUA_Achr1P14790_001	Banana	vacuole	50.17	36.12
TraesCS7D01G272600.1	Wheat	golgi, vacuole	48.82	34.52
HORVU7Hr1G057460.1	Barley	golgi	48.32	34.5
CDY70594	Canola	cytosol	24.07	34.38
CDY69471	Canola	cytosol	23.91	34.13
TraesCS7A01G272400.2	Wheat	vacuole	48.48	33.76
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	47.64	33.73
KXG25431	Sorghum	golgi	48.15	33.73
Zm00001d053225_P005	Maize	golgi, vacuole	47.64	33.45
CDY69031	Canola	cytosol, plastid, vacuole	34.85	33.33
Os08t0549200-01	Rice	plasma membrane	47.31	33.14
TraesCS7B01G169700.1	Wheat	vacuole	48.32	32.95
Zm00001d032022_P003	Maize	golgi, vacuole	46.97	32.82
CDY59725	Canola	cytosol	17.0	32.37
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	45.12	32.02
TraesCS5B01G331300.1	Wheat	golgi, vacuole	45.12	31.94
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	44.95	31.82
CDX76254	Canola	golgi, nucleus, vacuole	31.48	31.8
CDY59691	Canola	cytosol, nucleus, vacuole	18.69	31.53
TraesCS5D01G336700.2	Wheat	vacuole	41.75	29.56
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	42.76	29.16
CDX84445	Canola	vacuole	35.02	28.89
CDY37486	Canola	golgi, vacuole	40.4	28.61
CDY51738	Canola	golgi, vacuole	40.24	28.49
CDX97513	Canola	golgi, vacuole	40.24	28.45
CDY23637	Canola	golgi, vacuole	40.07	28.37
Zm00001d022621_P005	Maize	vacuole	42.42	28.19
CDY39845	Canola	vacuole	33.5	27.64
CDY31349	Canola	vacuole	33.67	26.99
CDY59693	Canola	vacuole	38.89	26.99
CDX89360	Canola	mitochondrion	31.65	26.9
CDX69219	Canola	vacuole	37.04	26.7
CDX94367	Canola	mitochondrion	31.99	26.69
CDX75569	Canola	golgi, vacuole	37.04	26.6
CDY20708	Canola	golgi, vacuole	31.82	26.18
CDX95380	Canola	vacuole	31.82	26.0
CDX93659	Canola	vacuole	35.69	25.92
CDY32919	Canola	golgi, vacuole	31.48	25.9
CDY43757	Canola	golgi, vacuole	32.15	25.78
CDX92753	Canola	golgi, vacuole	30.81	25.7
CDX84446	Canola	golgi, vacuole	31.99	25.64
CDY42755	Canola	vacuole	30.64	25.56
CDY11899	Canola	golgi, vacuole	30.98	25.48
CDY65885	Canola	vacuole	35.19	25.46
CDY36028	Canola	plastid	30.47	25.42
CDX67790	Canola	vacuole	34.68	25.28
Os09t0539200-01	Rice	vacuole	18.86	25.11
CDY28339	Canola	vacuole	33.16	25.0
CDY34975	Canola	golgi, plasma membrane, vacuole	33.16	25.0
CDY15749	Canola	golgi, vacuole	35.19	24.76
CDY53959	Canola	golgi, vacuole	30.3	24.66
CDY47949	Canola	golgi, vacuole	30.13	24.52
CDY31204	Canola	golgi, vacuole	34.51	24.29
CDY04567	Canola	golgi, vacuole	34.68	24.24
CDX83288	Canola	golgi, vacuole	34.34	24.14
CDY23785	Canola	vacuole	35.02	23.29
CDY19166	Canola	golgi, vacuole	34.68	23.2
CDY32304	Canola	cytosol	33.67	22.68
CDY70160	Canola	vacuole	20.03	21.83
CDY53917	Canola	plastid	32.49	18.76
CDX88594	Canola	golgi, vacuole	8.25	15.08
CDX67763	Canola	golgi, plasma membrane, vacuole	17.85	13.75
CDX98327	Canola	golgi, vacuole	1.85	4.38
CDX76255	Canola	extracellular	0.0	0.0

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	Gene3D:3.20.20.80	MapMan:35.1	GO:A0A078JRA7	UniProt:A0A078JRA7	InterPro:BetaGal_jelly_roll_dom
EnsemblPlants:CDY70118	ProteinID:CDY70118	ProteinID:CDY70118.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00096552001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_2_N	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140
PFAM:PF02837	PFAM:PF13364	PRINTS:PR00742	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF52
MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0004EEAF86	SEG:seg	:

Description

BnaA07g36410DBnaA07g36410D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JRA7]

Coordinates

chrLK041225:-:740..3524

Molecular Weight (calculated)

66691.4 Da

IEP (calculated)

9.557

GRAVY (calculated)

-0.564

Length

594 amino acids

Sequence
(BLAST)

001: GDTFPGPNKK NKPSLWTENW TTQFRVFGDP PAHRSVEDIA YSVARFFSKN GSHVNYYMYH GGTNFGRTSA HYVTTRYYDD APLDEFGLER EPKYGHLKLL
101: HNALNLCKKA LLWGHSRTEK PGKDTEIRYY EQPGTKVCAA FLANNNTEAA ETIKFKGKEH VIPPRSISIL PDCKTVVYST AEVISQHTSR NYVKSKKANK
201: KFDFKVFTET VPSELKGESF IPVELYGLTE DVTDYGWYTT NFKIDDNDLK KKGGKYTLRI ASLGHALHVW LNGEYLGNGH GSHEEKSFVF QKQVSLKEGE
301: NHLTMLGVLT GFPDSGSYLE HRYTGPRSVS ILGLSSGPLD LTEKNKWGNK VGMEGEKLGI HAEKGLKKVK WQKFSGKAPG LTWYQTRFDA PESKSSVAVR
401: MNGMGKGLIW VNGEGVGRYW MSFLSPLKNP TQVEYHIPRS FLKPKKNLLV IFEEEPNVKP ELIDFVIINR DTVCSYIGEN YTPSVRHWTK KNDKVQAIAD
501: DVFLTANLKC SGTKKIAAVE FASFGNPTGT CGNFTLGSCN APASKQVIEK YCLGKSECDI PVNKSTFQQD KKDSCPKVVK MLAVQVKCGR TNKN

Best Arabidopsis Sequence Match ( AT1G77410.2 )
(BLAST)

001: MVKHNVRGIL GFSITHCRGL PFWLHNVQGI VFRTDNEPFK YHMKRYAKMI VKLMKSENLY ASQGGPIILS QIENEYGMVG RAFRQEGKSY VKWTAKLAVE
101: LDTGVPWVMC KQDDAPDPLV NACNGRQCGE TFKGPNSPNK PAIWTENWTS FYQTYGEEPL IRSAEDIAFH VALFIAKNGS FVNYYMYHGG TNFGRNASQF
201: VITSYYDQAP LDEYGLLRQP KWGHLKELHA AVKLCEEPLL SGLQTTISLG KLQTAFVFGK KANLCAAILV NQDKCESTVQ FRNSSYRLSP KSVSVLPDCK
301: NVAFNTAKVN AQYNTRTRKA RQNLSSPQMW EEFTETVPSF SETSIRSESL LEHMNTTQDT SDYLWQTTRF QQSEGAPSVL KVNHLGHALH AFVNGRFIGS
401: MHGTFKAHRF LLEKNMSLNN GTNNLALLSV MVGLPNSGAH LERRVVGSRS VKIWNGRYQL YFNNYSWGYQ VGLKGEKFHV YTEDGSAKVQ WKQYRDSKSQ
501: PLTWYKASFD TPEGEDPVAL NLGSMGKGEA WVNGQSIGRY WVSFHTYKGN PSQIWYHIPR SFLKPNSNLL VILEEEREGN PLGITIDTVS VTEVCGHVSN
601: TNPHPVISPR KKGLNRKNLT YRYDRKPKVQ LQCPTGRKIS KILFASFGTP NGSCGSYSIG SCHSPNSLAV VQKACLKKSR CSVPVWSKTF GGDSCPHTVK
701: SLLVRAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.