Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 6
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31414 | Canola | cytosol, golgi, mitochondrion, peroxisome | 81.37 | 88.46 |
| CDY70118 | Canola | cytosol | 61.91 | 88.38 |
| Bra001991.1-P | Field mustard | golgi, vacuole | 84.32 | 88.05 |
| Bra013052.1-P | Field mustard | golgi, vacuole | 87.74 | 87.94 |
| AT4G35010.1 | Thale cress | vacuole | 85.14 | 85.44 |
| CDY02241 | Canola | golgi, vacuole | 87.74 | 75.23 |
| CDX89744 | Canola | vacuole | 88.21 | 68.88 |
| KRH24309 | Soybean | golgi, vacuole | 58.61 | 58.96 |
| KRH29286 | Soybean | extracellular, golgi, vacuole | 57.67 | 58.08 |
| VIT_03s0038g02360.t01 | Wine grape | extracellular, golgi | 56.6 | 57.62 |
| Solyc10g055470.1.1 | Tomato | vacuole | 55.78 | 57.06 |
| PGSC0003DMT400031178 | Potato | vacuole | 55.66 | 56.94 |
| GSMUA_AchrUn_... | Banana | extracellular, vacuole | 54.72 | 56.86 |
| GSMUA_Achr1P26480_001 | Banana | vacuole | 54.48 | 56.83 |
| Solyc01g111540.2.1 | Tomato | unclear | 55.19 | 56.32 |
| GSMUA_Achr1P14790_001 | Banana | vacuole | 54.25 | 55.76 |
| PGSC0003DMT400015841 | Potato | endoplasmic reticulum, golgi, vacuole | 53.07 | 55.62 |
| KRH60700 | Soybean | extracellular, golgi, vacuole | 55.19 | 55.45 |
| Os09t0539200-01 | Rice | vacuole | 27.83 | 52.91 |
| AT4G38590.2 | Thale cress | golgi, vacuole | 65.21 | 52.57 |
| GSMUA_Achr4P05130_001 | Banana | golgi, plastid, vacuole | 51.77 | 52.32 |
| TraesCS7D01G272600.1 | Wheat | golgi, vacuole | 49.88 | 50.36 |
| HORVU7Hr1G057460.1 | Barley | golgi | 49.29 | 50.24 |
| Zm00001d053225_P005 | Maize | golgi, vacuole | 50.12 | 50.24 |
| KXG25431 | Sorghum | golgi | 50.24 | 50.24 |
| Zm00001d032022_P003 | Maize | golgi, vacuole | 49.53 | 49.41 |
| Os08t0549200-01 | Rice | plasma membrane | 49.41 | 49.41 |
| TraesCS7A01G272400.2 | Wheat | vacuole | 49.53 | 49.24 |
| TraesCS5B01G331300.1 | Wheat | golgi, vacuole | 48.0 | 48.51 |
| TraesCS5A01G330900.1 | Wheat | endoplasmic reticulum, vacuole | 48.0 | 48.51 |
| TraesCS7B01G169700.1 | Wheat | vacuole | 49.29 | 47.99 |
| KXG36088 | Sorghum | endoplasmic reticulum, golgi, vacuole | 47.17 | 47.79 |
| AT5G63800.1 | Thale cress | vacuole | 40.33 | 47.63 |
| TraesCS5D01G336700.2 | Wheat | vacuole | 45.52 | 46.01 |
| AT1G77410.3 | Thale cress | golgi, vacuole | 44.46 | 45.98 |
| HORVU7Hr1G009630.2 | Barley | cytosol | 36.56 | 44.99 |
| Zm00001d006243_P005 | Maize | endoplasmic reticulum, golgi, vacuole | 45.52 | 44.32 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 43.28 | 43.33 |
| AT1G45130.1 | Thale cress | golgi, vacuole | 37.26 | 43.17 |
| AT5G56870.1 | Thale cress | vacuole | 36.56 | 42.82 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 42.33 | 41.94 |
| AT4G26140.7 | Thale cress | vacuole | 37.15 | 41.83 |
| Zm00001d022621_P005 | Maize | vacuole | 43.75 | 41.5 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 38.21 | 41.49 |
| AT1G31740.1 | Thale cress | vacuole | 37.38 | 40.69 |
| AT2G28470.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 40.8 | 40.61 |
| AT5G63810.1 | Thale cress | golgi, vacuole | 35.38 | 40.49 |
| AT5G20710.1 | Thale cress | vacuole | 37.85 | 38.86 |
| AT2G32810.1 | Thale cress | golgi, vacuole | 39.27 | 37.54 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EntrezGene:816174 | UniProt:A0A178VXE0 | ProteinID:AAD24606.1 |
| ProteinID:AEC06532.1 | EMBL:AJ270309 | ArrayExpress:AT2G16730 | EnsemblPlantsGene:AT2G16730 | RefSeq:AT2G16730 | TAIR:AT2G16730 |
| RefSeq:AT2G16730-TAIR-G | EnsemblPlants:AT2G16730.1 | TAIR:AT2G16730.1 | Unigene:At.707 | Symbol:BGAL13 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 |
| GO:GO:0048046 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF |
| InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | RefSeq:NP_179264.2 | ProteinID:OAP09915.1 | PFAM:PF01301 |
| PFAM:PF02140 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001185 | PO:PO:0006339 | PO:PO:0006340 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 |
| PANTHER:PTHR23421:SF52 | UniProt:Q9SCU9 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000009D126 | SEG:seg | : | : | : | : |
Description
BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
Coordinates
chr2:-:7261783..7266346
Molecular Weight (calculated)
95905.3 Da
IEP (calculated)
8.925
GRAVY (calculated)
-0.549
Length
848 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.