Factsheet for Zm00001d053225_P005

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25431	Sorghum	golgi	93.5	93.28
Zm00001d032022_P003	Maize	golgi, vacuole	91.73	91.29
HORVU7Hr1G057460.1	Barley	golgi	73.64	74.88
TraesCS7D01G272600.1	Wheat	golgi, vacuole	72.93	73.45
Os08t0549200-01	Rice	plasma membrane	73.4	73.23
TraesCS7A01G272400.2	Wheat	vacuole	72.22	71.63
TraesCS7B01G169700.1	Wheat	vacuole	73.05	70.95
GSMUA_AchrUn_...	Banana	extracellular, vacuole	58.39	60.54
GSMUA_Achr1P14790_001	Banana	vacuole	58.04	59.52
GSMUA_Achr1P26480_001	Banana	vacuole	56.86	59.16
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	54.96	55.42
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	56.97	55.34
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	52.72	53.54
Solyc01g111540.2.1	Tomato	unclear	51.65	52.59
Zm00001d022621_P005	Maize	vacuole	55.44	52.46
KRH24309	Soybean	golgi, vacuole	52.01	52.19
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	49.76	52.04
Solyc10g055470.1.1	Tomato	vacuole	50.83	51.87
KRH60700	Soybean	extracellular, golgi, vacuole	51.65	51.78
KRH29286	Soybean	extracellular, golgi, vacuole	51.42	51.66
PGSC0003DMT400031178	Potato	vacuole	50.35	51.39
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	46.93	50.9
Bra013052.1-P	Field mustard	golgi, vacuole	50.71	50.71
Bra001991.1-P	Field mustard	golgi, vacuole	48.46	50.49
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	50.24	50.12
CDX75479	Canola	vacuole	50.0	50.06
Bra011577.1-P	Field mustard	vacuole	50.0	50.06
CDY40650	Canola	vacuole	49.76	49.88
CDX69103	Canola	vacuole	49.76	49.88
Bra017687.1-P	Field mustard	vacuole	49.76	49.88
AT4G35010.1	Thale cress	vacuole	49.76	49.82
CDX72512	Canola	vacuole	49.41	49.53
CDX72747	Canola	vacuole	50.35	48.08
CDY70118	Canola	cytosol	33.45	47.64
CDY22419	Canola	cytosol	50.59	44.77
Bra033571.1-P	Field mustard	cytosol	50.59	44.77
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	42.2	43.54
CDY02241	Canola	golgi, vacuole	50.71	43.38
Zm00001d042656_P001	Maize	golgi, vacuole	35.7	43.02
Zm00001d046357_P001	Maize	extracellular	34.75	40.72
Zm00001d043393_P001	Maize	extracellular	39.24	40.39
Zm00001d044290_P005	Maize	golgi, vacuole	39.48	40.24
AT4G38590.2	Thale cress	golgi, vacuole	49.53	39.83
CDX89744	Canola	vacuole	50.59	39.41
Zm00001d048440_P003	Maize	vacuole	40.19	39.13
Zm00001d028474_P002	Maize	vacuole	41.02	38.64
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	39.48	38.57
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	40.66	37.47
Zm00001d053585_P002	Maize	plastid	35.93	36.67
Zm00001d041880_P001	Maize	extracellular, plasma membrane	38.77	35.73

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100384558
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	ProteinID:AQK58978.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	UniProt:K7V4R8
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF52	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002211E02	EnsemblPlantsGene:Zm00001d053225	EnsemblPlants:Zm00001d053225_P005	EnsemblPlants:Zm00001d053225_T005	SEG:seg	:

Description

Beta-galactosidase 11

Coordinates

chr4:+:220840816..220845895

Molecular Weight (calculated)

95539.1 Da

IEP (calculated)

9.477

GRAVY (calculated)

-0.334

Length

846 amino acids

Sequence
(BLAST)

001: MHVDMSHRVR LAAAALVVVA ALALAPGAAA AWQLTKNGTV VSYDRRSLII DGRREIFFSG SIHYPRSPPD MWPELIAKAK EGGLNTIETY IFWNIHEPEK
101: GQFDFEGRYD IVRFFKLIQE HNMYAMVRLG PFIQAEWNHG GLPYWLREIP DIVFRTNNEP YKMHMETFVK IIIKRLKDAN LFASQGGPII LAQIENEYQH
201: LEAAFKNDGT KYIKWAANMA ISTNVGIPWI MCKQTKAPSD VIPTCNGRNC GDTWPGPMNK SMPLLWTENW TAQYRVFGDP PSQRSAEDIA FAVARFFSVG
301: GTMTNYYMYH GGTNFGRTSA AFVMPKYYDE APLDEFGLYK EPKWGHLRDL HLALKLCKKA LLWGKTSTEK LGKQFEARVF EIPEQKVCVA FLSNHNTKDD
401: VTLTFRGQSY FVPRHSISIL ADCKTVVFGT QHVNAQHNQR TFHFADQTTQ NNVWQMFDEE KVPKYKQSKI RLRKAGDLYN LTKDKTDYVW YTSSFKLEAD
501: DMPIRRDIKT VLEVNSHGHA SVAFVNTKFV GCGHGTKMNK AFTLEKPMDL KKGVNHVAVL ASTMGMMDSG AYLEHRLAGV DRVQIKGLNA GTLDLTNNGW
601: GHIVGLVGEQ KQIYTDKGMG SVTWKPAVND RPLTWYKRHF DMPSGEDPIV LDMSTMGKGL MFVNGQGIGR YWISYKHALG RPSQQLYHIP RSFLRQKDNV
701: LVLFEEEFGR PDAIMILTVK RDNICTFISE RNPAHIKSWE RKDSQITVTA ADLKPRATLT CSPKKLIQQV VFASYGNPMG ICGNYTIGSC HTPRAKELVE
801: KACLGKRICT LPVSADVYGG DVNCPGTTAT LAVQAKCSKR SPRAAQ

Best Arabidopsis Sequence Match ( AT2G16730.1 )
(BLAST)

001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN

Arabidopsis Description

BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.