Factsheet for Zm00001d042654_P005

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	87.99	90.39
TraesCS3D01G379300.2	Wheat	vacuole	76.1	78.08
TraesCS3A01G386300.1	Wheat	golgi, vacuole	75.75	78.0
HORVU3Hr1G081960.9	Barley	vacuole	75.52	77.31
TraesCS3D01G379200.1	Wheat	vacuole	75.29	77.25
TraesCS3B01G418400.2	Wheat	vacuole	75.29	77.25
TraesCS3A01G386200.1	Wheat	vacuole	74.36	76.3
HORVU3Hr1G081970.1	Barley	vacuole	70.79	74.85
TraesCS3B01G418300.2	Wheat	vacuole	73.44	74.13
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	74.83	70.51
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	55.77	63.55
VIT_07s0031g02480.t01	Wine grape	extracellular	60.62	61.98
KRH63980	Soybean	vacuole	60.16	61.8
KRH53957	Soybean	nucleus	60.28	61.78
CDY43757	Canola	golgi, vacuole	50.46	58.97
Bra024238.1-P	Field mustard	golgi, vacuole	50.35	58.84
AT5G63810.1	Thale cress	golgi, vacuole	50.35	58.84
CDX84446	Canola	golgi, vacuole	50.0	58.43
PGSC0003DMT400039333	Potato	extracellular, golgi	56.0	58.01
Solyc03g019890.2.1	Tomato	nucleus	57.97	57.7
Zm00001d046357_P001	Maize	extracellular	40.65	48.75
Zm00001d028474_P002	Maize	vacuole	49.88	48.11
Zm00001d048440_P003	Maize	vacuole	47.58	47.41
Zm00001d044290_P005	Maize	golgi, vacuole	45.03	46.99
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	47.58	44.88
Zm00001d041880_P001	Maize	extracellular, plasma membrane	46.77	44.12
Zm00001d053585_P002	Maize	plastid	40.65	42.46
Zm00001d043393_P001	Maize	extracellular	39.84	41.97
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	38.68	40.85
Zm00001d053225_P005	Maize	golgi, vacuole	38.57	39.48
Zm00001d042656_P001	Maize	golgi, vacuole	31.76	39.17
Zm00001d032022_P003	Maize	golgi, vacuole	37.99	38.71
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	35.57	35.36
Zm00001d022621_P005	Maize	vacuole	34.53	33.45

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.2.1.2.4	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6N5T1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0009628
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	GO:GO:0080167	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
ProteinID:ONM35983.1	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF67	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0008454BBE	EnsemblPlantsGene:Zm00001d042654
EnsemblPlants:Zm00001d042654_P005	EnsemblPlants:Zm00001d042654_T005	SEG:seg	:	:	:

Description

Beta-galactosidase

Coordinates

chr3:-:175449730..175457135

Molecular Weight (calculated)

96236.3 Da

IEP (calculated)

6.809

GRAVY (calculated)

-0.263

Length

866 amino acids

Sequence
(BLAST)

001: MAAAAASFSA LPFLLLLLLV PSLDGASNVT YDHRSLIISG RRRLVISTSI HYPRSVPEMW PKLVAEAKDG GADCIETYVF WNGHEIAPGQ YYFEDRFDLV
101: RFVKVVRDAG LLLILRIGPY VAAEWNYGGV PVWLHYVPGT VFRTNNEPFK NHVKSFTTYI VDMMKKEQLF ASQGGNIILA QIENEYGDYY EQAYGAGGKP
201: YAMWAASMAL AQNTGVPWIM CQESDAPDPV INSCNGFYCD GFQPNSPTKP KIWTENWPGW FQTFGESNPH RPPEDVAFAV ARFFEKGGSV QNYYVKVDKF
301: SAILLKYHGG TNFGRTTGGP FITTSYDYDA PIDEYGLALF LSTSEISKVG TSEGSSQIYK IADIYSDQSG GCVAFLANID SANDKVVTFR NRQYDLPAWS
401: VSILPDCRNV VFNTAKVQSQ TSMVTMVPES LQASKPERWS IFRERTGIWG KNDFVRNGFV DHINTTKDST DYLWYTTRLV YFSLFFFERS TSASFIFSVD
501: GSYSSKGSHA VLNIDSNGHG VHAFLNNVLI GSAYGNGSQS RFSVKLPINL RTGKNELALL SMTVGLQVNY ALYKNAGFAY EWIGAGFTNV NISGVRTGTI
601: DLSSNNWAYK IGLEGEYYNL FKPDQTNNQR WIPQSEPPKN QPLTWYKVNV DVPQGDDPVG IDMQSMGKGL AWLNGNAIGR YWPRTSSIND RCTPSCNYRG
701: TFIPDKCRTG CGQPTQRWYH IPRSWFHPSG NILVVFEEKG GDPTKITFSR RAVTSVCSFV SEHFPSIDLE SWDESAMTEG TPPAKAQLFC PEGKSISSVK
801: FASLGNPSGT CRSYQMGRCH HPNSLSVVEK ACLNTNSCTV SLTDESFGKD LCPGVTKTLA IEADCS

Best Arabidopsis Sequence Match ( AT5G63810.1 )
(BLAST)

001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V

Arabidopsis Description

BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.