CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

nucleus 1
golgi 5
extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29286	Soybean	extracellular, golgi, vacuole	66.23	66.39
KRH24309	Soybean	golgi, vacuole	64.69	64.77
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	60.78	61.58
PGSC0003DMT400031178	Potato	vacuole	57.46	58.5
Solyc10g055470.1.1	Tomato	vacuole	57.35	58.38
GSMUA_AchrUn_...	Banana	extracellular, vacuole	55.45	57.35
Solyc01g111540.2.1	Tomato	unclear	56.4	57.28
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	54.62	56.98
GSMUA_Achr1P26480_001	Banana	vacuole	54.74	56.83
GSMUA_Achr1P14790_001	Banana	vacuole	55.09	56.36
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	51.07	55.26
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	55.45	55.19
Bra011577.1-P	Field mustard	vacuole	54.86	54.79
CDX75479	Canola	vacuole	54.86	54.79
CDX69103	Canola	vacuole	54.74	54.74
AT4G35010.1	Thale cress	vacuole	54.74	54.67
Bra001991.1-P	Field mustard	golgi, vacuole	52.25	54.31
CDY40650	Canola	vacuole	54.15	54.15
Bra013052.1-P	Field mustard	golgi, vacuole	54.15	54.02
CDX72512	Canola	vacuole	53.91	53.91
Bra017687.1-P	Field mustard	vacuole	53.79	53.79
HORVU7Hr1G057460.1	Barley	golgi	51.66	52.4
CDY70118	Canola	cytosol	36.85	52.36
CDX72747	Canola	vacuole	54.86	52.26
Os08t0549200-01	Rice	plasma membrane	52.49	52.24
KXG25431	Sorghum	golgi	52.13	51.89
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	51.54	51.85
Zm00001d053225_P005	Maize	golgi, vacuole	51.78	51.65
Zm00001d032022_P003	Maize	golgi, vacuole	51.9	51.53
TraesCS7D01G272600.1	Wheat	golgi, vacuole	50.95	51.19
Os09t0539200-01	Rice	vacuole	26.54	50.22
TraesCS7A01G272400.2	Wheat	vacuole	50.71	50.18
TraesCS7B01G169700.1	Wheat	vacuole	51.18	49.6
KRH64633	Soybean	vacuole	40.52	49.14
KRH53267	Soybean	golgi, vacuole	40.4	48.92
KRH53958	Soybean	golgi, vacuole	41.47	48.81
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	48.46	48.75
CDY22419	Canola	cytosol	54.98	48.54
Bra033571.1-P	Field mustard	cytosol	54.98	48.54
TraesCS5B01G331300.1	Wheat	golgi, vacuole	48.1	48.39
KRH40964	Soybean	golgi, vacuole	40.28	48.3
KRH63978	Soybean	golgi, vacuole	40.88	48.12
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	47.27	47.67
TraesCS5D01G336700.2	Wheat	vacuole	46.33	46.6
CDY02241	Canola	golgi, vacuole	54.15	46.21
KRH15132	Soybean	mitochondrion, nucleus	39.57	45.63
KRH05876	Soybean	nucleus	39.22	45.22
KRH61101	Soybean	nucleus	39.22	44.97
KRH37385	Soybean	nucleus	38.39	44.94
KRH12385	Soybean	vacuole	38.39	44.94
HORVU7Hr1G009630.2	Barley	cytosol	36.49	44.7
KRH10007	Soybean	nucleus	44.31	44.52
KRH23324	Soybean	vacuole	44.19	44.35
KRH47126	Soybean	nucleus	44.19	44.14
KRH44153	Soybean	nucleus	43.96	44.01
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	45.14	43.74
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	43.48	43.74
KRH51779	Soybean	vacuole	36.73	43.48
AT4G38590.2	Thale cress	golgi, vacuole	54.15	43.44
KRH02714	Soybean	golgi, vacuole	43.01	43.27
KRH76716	Soybean	nucleus	42.54	42.28
KRG89008	Soybean	nucleus	41.82	42.22
KRH08131	Soybean	nucleus	42.42	42.22
KRH28740	Soybean	nucleus	42.65	42.2
KRH29942	Soybean	extracellular, golgi, vacuole	41.82	42.12
KRH69834	Soybean	extracellular, golgi	42.3	42.1
CDX89744	Canola	vacuole	54.15	42.08
KRH22910	Soybean	nucleus	41.59	41.79
Zm00001d022621_P005	Maize	vacuole	44.08	41.61
KRH26431	Soybean	golgi, vacuole	41.23	41.43
KRH53957	Soybean	nucleus	41.47	41.42
KRH63980	Soybean	vacuole	41.23	41.28
KRH07365	Soybean	extracellular, golgi, vacuole	38.63	39.47
KRH70131	Soybean	vacuole	38.98	39.4
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	38.51	39.06
KRH19351	Soybean	extracellular, golgi, vacuole	37.56	38.33
KRH02579	Soybean	extracellular, golgi, vacuole	37.91	37.91
KRH48710	Soybean	vacuole	37.68	37.59
KRH48708	Soybean	vacuole	37.68	37.59
KRH42784	Soybean	nucleus	39.69	36.85
KRH06832	Soybean	mitochondrion	31.64	35.6
KRH38266	Soybean	cytosol, peroxisome	24.53	35.38

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100791456
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A0R4J2Z7	EMBL:ACUP02002135
InterPro:BetaGal_jelly_roll_dom	EnsemblPlantsGene:GLYMA_04G003900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	EnsemblPlants:KRH60700	ProteinID:KRH60700	ProteinID:KRH60700.1	InterPro:Lectin_gal-bd_dom
PFAM:PF01301	PFAM:PF02140	PFAM:PF13364	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF52	MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0000F35E73	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:318939..321963

Molecular Weight (calculated)

94281.7 Da

IEP (calculated)

8.914

GRAVY (calculated)

-0.309

Length

844 amino acids

Sequence
(BLAST)

001: MEERTRSILI LMTLLSISIA GGNAGGLQHH KGRHGKHGRH MSARNVTYDG KSLFINGRRE ILFSGSVHYT RSTPDMWPDI LDKARRGGLN VIQTYVFWNA
101: HEPEPGKFNF QGNYDLVKFI RLVQAKGMFV TLRVGPFIQA EWNHGGLPYW LREVPGIIFR SDNEPYKFHM KAFVSKIIQM MKDEKLFAPQ GGPIILAQIE
201: NEYNHIQLAY EEKGDSYVQW AANMAVATDI GVPWLMCKQR DAPDPVINAC NGRHCGDTFA GPNKPYKPAI WTENWTAQYR VHGDPPSQRS AEDIAFSVAR
301: FFSKNGNLVN YYMYHGGTNF GRTSSVFSTT RYYDEAPLDE YGLPREPKWS HLRDVHKALL LCRRAILGGV PSVQKLNHFH EVRTFERVGT NMCAAFITNN
401: HTMEPATINF RGTNYFLPPH SISILPDCKT VVFNTQQIVS QHNSRNYERS PAANNFHWEM FNEAIPTAKK MPINLPVPAE LYSLLKDTTD YAWYTTSFEL
501: SQEDMSMKPG VLPVLRVMSL GHSMVAFVNG DIVGTAHGTH EEKSFEFQTP VLLRVGTNYI SLLSSTVGLP DSGAYMEHRY AGPKSINILG LNRGTLDLTR
601: NGWGHRVGLK GEGKKVFSEE GSTSVKWKPL GAVPRALSWY RTRFGTPEGT GPVAIRMSGM AKGMVWVNGN NIGRYWMSYL SPLGKPTQSE YHIPRSFLNP
701: QDNLLVIFEE EARVPAQVEI LNVNRDTICS VVGERDPANV NSWVSRRGNF HPVVKSVGAA ASMACATGKR IVAVEFASFG NPSGYCGDFA MGSCNAAASK
801: QIVERECLGQ EACTLALDRA VFNNNGVDAC PDLVKQLAVQ VRCA

Best Arabidopsis Sequence Match ( AT2G16730.1 )
(BLAST)

001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN

Arabidopsis Description

BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.