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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:golgi
 nucleus: 21132161
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH05876 Soybean nucleus 96.86 96.86
KRH61101 Soybean nucleus 83.33 82.88
KRH51779 Soybean vacuole 76.91 78.96
Bra036334.1-P Field mustard golgi, vacuole 74.04 74.25
CDY53959 Canola golgi, vacuole 74.04 74.25
CDY47949 Canola golgi, vacuole 73.91 74.11
AT1G45130.1 Thale cress golgi, vacuole 73.77 73.77
CDY36028 Canola plastid 70.49 72.47
Bra014036.1-P Field mustard plastid 70.36 72.33
PGSC0003DMT400009496 Potato nucleus, peroxisome, vacuole 52.87 71.53
Solyc04g080840.1.1 Tomato extracellular, golgi 71.58 71.29
VIT_18s0001g13230.t01 Wine grape extracellular, golgi 78.42 67.21
KRH76716 Soybean nucleus 74.73 64.43
KRH28740 Soybean nucleus 74.18 63.66
KRH37385 Soybean nucleus 62.57 63.52
KRH12385 Soybean vacuole 62.43 63.38
KRH69834 Soybean extracellular, golgi 73.22 63.21
KRH08131 Soybean nucleus 72.95 62.97
GSMUA_Achr9P21610_001 Banana extracellular, golgi 73.22 62.84
GSMUA_Achr4P13580_001 Banana golgi, vacuole 74.18 62.56
EER92805 Sorghum vacuole 71.17 61.88
Os03t0165400-01 Rice vacuole 70.9 61.71
HORVU4Hr1G074280.4 Barley vacuole 69.4 59.98
Zm00001d048440_P003 Maize vacuole 71.17 59.95
TraesCS4A01G022500.2 Wheat golgi, vacuole 69.13 59.95
TraesCS4B01G280900.1 Wheat golgi, vacuole 69.13 59.88
TraesCS4D01G279400.4 Wheat vacuole 69.13 59.67
GSMUA_Achr4P06620_001 Banana cytosol 52.05 59.16
KRH47126 Soybean nucleus 67.35 58.34
KRH44153 Soybean nucleus 67.08 58.24
KRH10007 Soybean nucleus 65.98 57.5
KRH23324 Soybean vacuole 65.57 57.07
Zm00001d027803_P002 Maize golgi, plasma membrane, vacuole 71.31 56.86
KRH02714 Soybean golgi, vacuole 63.39 55.3
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 63.25 55.18
KRH53267 Soybean golgi, vacuole 47.68 50.07
KRH64633 Soybean vacuole 47.54 50.0
KRH22910 Soybean nucleus 55.46 48.33
KRH40964 Soybean golgi, vacuole 46.31 48.15
KRH29942 Soybean extracellular, golgi, vacuole 54.92 47.97
KRH26431 Soybean golgi, vacuole 54.78 47.74
KRG89008 Soybean nucleus 54.1 47.37
KRH53958 Soybean golgi, vacuole 46.17 47.14
KRH63978 Soybean golgi, vacuole 46.17 47.14
KRH63980 Soybean vacuole 52.6 45.67
KRH53957 Soybean nucleus 52.32 45.33
KRH70131 Soybean vacuole 49.73 43.59
KRH38264 Soybean endoplasmic reticulum, golgi, vacuole 48.63 42.79
KRH19351 Soybean extracellular, golgi, vacuole 47.68 42.2
KRH07365 Soybean extracellular, golgi, vacuole 47.27 41.89
KRH02579 Soybean extracellular, golgi, vacuole 48.22 41.82
KRH42784 Soybean nucleus 50.0 40.26
KRH48710 Soybean vacuole 45.77 39.6
KRH48708 Soybean vacuole 45.77 39.6
KRH60700 Soybean extracellular, golgi, vacuole 45.63 39.57
KRH24309 Soybean golgi, vacuole 44.54 38.67
KRH29286 Soybean extracellular, golgi, vacuole 43.44 37.77
KRH38266 Soybean cytosol, peroxisome 29.78 37.27
KRH06832 Soybean mitochondrion 37.98 37.07
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23EntrezGene:100818981
Gene3D:2.60.120.260MapMan:21.3.2.2.2Gene3D:3.20.20.80UniProt:A0A0R0GAA6EMBL:ACUP02008564ncoils:Coil
EnsemblPlantsGene:GLYMA_14G070600GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR008979EnsemblPlants:KRH15132ProteinID:KRH15132
ProteinID:KRH15132.1PFAM:PF01301PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF51
MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0000F35E92SEG:seg
Description
hypothetical protein
Coordinates
chr14:-:5921265..5927784
Molecular Weight (calculated)
81462.6 Da
IEP (calculated)
8.524
GRAVY (calculated)
-0.257
Length
732 amino acids
Sequence
(BLAST)
001: METNSVSKLL LLVFSVLFVG SELIHCSVTY DRKAIIINGQ RRILISGSIH YPRSTPEMWE DLIRKAKDGG LDVIDTYVFW NVHEPSPGNY NFEGRNDLVR
101: FIKTVQRVGL YVHLRIGPYV CAEWNFGGFP VWLKYVPGIS FRTDNGPFKA AMQGFTQKIV QMMKNEKLFQ SQGGPIILSQ IENEYGPESG QLGAAGHAYT
201: NWAAKMAVGL ATGVPWVMCK QDDAPDPVIN TCNGFYCDYF SPNKPYKPSL WTESWSGWFT EFGGPIYQRP VQDLAFAVAR FVQKGGSLFN YYMYHGGTNF
301: GRSAGGPFIT TSYDYDAPID EYGLIREPKY GHLKDLHKAI KQCEHALVSS DPTVTSLGTY EQAHVFSSKN GACAAFLANY HSNSAARVKF NNRNYDLPPW
401: SISILPDCRT DVFNTARVSF QTSQIQMLPS NSRLLSWETY DEDVSSLAES SKITASGLLE QISTTRDTSD YLWYITSADI SSSESFLRGR NKPSITVHSA
501: GHAVHVFVNG QFSGSAFGTS EDRSCTFNGP VNLRAGTNKI ALLSVAVGLP NVGFHFETWK AGITGVLLHG LDHGQKDLTW QKWSYQIGLK GEAMNLVSPN
601: GVSSVDWVRD SLAVRSQSQL KWHKAYFNAP DGVEPLALDL SSMGKGQVWI NGQSIGRYWM VYAKGACGSC NYAGTYRPAK CQLGCGQPTQ RWYHVPRSWL
701: KPTKNLIVVF EELGGNPWKI ALVKRTIHTP AN
Best Arabidopsis Sequence Match ( AT1G45130.1 )
(BLAST)
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Arabidopsis Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.