Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69219 | Canola | vacuole | 91.36 | 94.9 |
| Bra011677.1-P | Field mustard | golgi, vacuole | 94.51 | 94.51 |
| CDX75569 | Canola | golgi, vacuole | 91.0 | 94.2 |
| CDY59693 | Canola | vacuole | 93.34 | 93.34 |
| CDY59691 | Canola | cytosol, nucleus, vacuole | 36.68 | 89.2 |
| CDY59725 | Canola | cytosol | 31.54 | 86.54 |
| KRH76716 | Soybean | nucleus | 78.97 | 79.62 |
| KRH28740 | Soybean | nucleus | 78.74 | 79.02 |
| KRH69834 | Soybean | extracellular, golgi | 78.27 | 79.01 |
| VIT_04s0023g02690.t01 | Wine grape | extracellular, golgi | 77.8 | 78.82 |
| KRH08131 | Soybean | nucleus | 77.92 | 78.66 |
| Bra017756.1-P | Field mustard | cytosol, nucleus, vacuole | 27.45 | 77.3 |
| PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 75.0 | 75.98 |
| Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 74.77 | 75.74 |
| GSMUA_Achr9P21610_001 | Banana | extracellular, golgi | 70.09 | 70.34 |
| EER92805 | Sorghum | vacuole | 68.34 | 69.48 |
| GSMUA_Achr4P13580_001 | Banana | golgi, vacuole | 70.21 | 69.24 |
| AT1G45130.1 | Thale cress | golgi, vacuole | 58.88 | 68.85 |
| Os03t0165400-01 | Rice | vacuole | 67.64 | 68.85 |
| GSMUA_Achr4P06620_001 | Banana | cytosol | 51.75 | 68.79 |
| TraesCS4B01G280900.1 | Wheat | golgi, vacuole | 67.17 | 68.05 |
| TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 67.06 | 68.01 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 67.29 | 67.92 |
| HORVU4Hr1G074280.4 | Barley | vacuole | 66.94 | 67.65 |
| Zm00001d048440_P003 | Maize | vacuole | 67.52 | 66.51 |
| Zm00001d027803_P002 | Maize | golgi, plasma membrane, vacuole | 68.11 | 63.51 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 61.92 | 62.57 |
| AT5G56870.1 | Thale cress | vacuole | 50.7 | 59.94 |
| AT4G26140.7 | Thale cress | vacuole | 51.64 | 58.7 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 51.75 | 56.72 |
| AT2G28470.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 54.09 | 54.34 |
| AT5G63810.1 | Thale cress | golgi, vacuole | 43.57 | 50.34 |
| AT5G63800.1 | Thale cress | vacuole | 40.65 | 48.47 |
| AT2G32810.1 | Thale cress | golgi, vacuole | 49.77 | 48.03 |
| AT1G31740.1 | Thale cress | vacuole | 43.34 | 47.63 |
| AT5G20710.1 | Thale cress | vacuole | 45.91 | 47.58 |
| AT1G77410.3 | Thale cress | golgi, vacuole | 45.33 | 47.32 |
| AT2G16730.1 | Thale cress | extracellular, golgi, vacuole | 41.94 | 42.33 |
| AT4G35010.1 | Thale cress | vacuole | 40.65 | 41.18 |
| AT4G38590.2 | Thale cress | golgi, vacuole | 38.2 | 31.08 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EntrezGene:829788 | UniProt:A0A178UZW3 | ProteinID:AEE86646.1 |
| ProteinID:AEE86647.1 | EMBL:AJ270299 | EMBL:AK230040 | ArrayExpress:AT4G36360 | EnsemblPlantsGene:AT4G36360 | RefSeq:AT4G36360 |
| TAIR:AT4G36360 | RefSeq:AT4G36360-TAIR-G | EnsemblPlants:AT4G36360.1 | TAIR:AT4G36360.1 | EMBL:AY056285 | EMBL:AY091432 |
| Unigene:At.703 | Symbol:BGAL3 | ProteinID:CAA18137.1 | ProteinID:CAB16852.1 | ProteinID:CAB80302.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 |
| GO:GO:0030312 | GO:GO:0048046 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | RefSeq:NP_568001.1 | RefSeq:NP_849506.1 |
| ProteinID:OAO99599.1 | PFAM:PF01301 | PFAM:PF02140 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00742 | ScanProsite:PS01182 |
| PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF79 | UniProt:Q9SCV9 | SUPFAM:SSF49785 | SUPFAM:SSF51445 |
| TMHMM:TMhelix | UniParc:UPI00000A0998 | EMBL:Z37275 | SEG:seg | : | : |
Description
BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
Coordinates
chr4:-:17176342..17181466
Molecular Weight (calculated)
95198.0 Da
IEP (calculated)
7.226
GRAVY (calculated)
-0.292
Length
856 amino acids
Sequence
(BLAST)
(BLAST)
001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.