Factsheet for TraesCS3A01G386100.3

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G418200.1	Wheat	vacuole	94.83	94.6
TraesCS3D01G379100.3	Wheat	vacuole	96.03	93.99
HORVU3Hr1G081980.9	Barley	cytosol, vacuole	85.2	93.9
Zm00001d042656_P001	Maize	golgi, vacuole	64.5	76.35
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	70.88	71.48
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	32.49	58.57
GSMUA_Achr11P...	Banana	golgi, vacuole	57.52	58.51
Bra024237.1-P	Field mustard	vacuole	34.42	57.09
AT5G63800.1	Thale cress	vacuole	48.38	55.99
KRH40964	Soybean	golgi, vacuole	47.41	55.97
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	46.33	55.4
CDY39845	Canola	vacuole	47.77	55.14
KRH63978	Soybean	golgi, vacuole	47.53	55.09
Bra029200.1-P	Field mustard	vacuole	47.65	55.0
CDX84445	Canola	vacuole	47.65	55.0
KRH53958	Soybean	golgi, vacuole	47.41	54.95
KRH53267	Soybean	golgi, vacuole	46.09	54.95
KRH64633	Soybean	vacuole	45.61	54.45
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	52.95	53.59
CDY31349	Canola	vacuole	47.65	53.44
VIT_18s0001g02220.t01	Wine grape	vacuole	52.23	53.38
PGSC0003DMT400023852	Potato	extracellular	40.07	52.94
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	45.49	52.21
Solyc11g018490.1.1	Tomato	cytosol	47.41	52.19
AT1G77410.3	Thale cress	golgi, vacuole	51.38	52.07
CDY43756	Canola	cytosol, nucleus, peroxisome	31.89	51.96
TraesCS6A01G185400.1	Wheat	golgi, vacuole	38.15	43.78
TraesCS3A01G208600.1	Wheat	plastid	43.44	43.23
TraesCS4A01G022500.2	Wheat	golgi, vacuole	43.56	42.89
TraesCS4A01G083700.3	Wheat	extracellular	43.08	41.97
TraesCS7A01G272400.2	Wheat	vacuole	43.08	41.97
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	36.1	41.78
TraesCS3A01G386300.1	Wheat	golgi, vacuole	41.4	40.9
TraesCS3A01G386200.1	Wheat	vacuole	40.43	39.81
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	39.59	39.21
TraesCS5A01G143600.4	Wheat	plasma membrane	41.4	37.76
TraesCS1A01G024100.1	Wheat	vacuole	35.74	35.87

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF118	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G386100	EnsemblPlants:TraesCS3A01G386100.3	SEG:seg	:

Description

No Description!

Coordinates

chr3A:+:635336634..635342768

Molecular Weight (calculated)

93258.9 Da

IEP (calculated)

8.475

GRAVY (calculated)

-0.352

Length

831 amino acids

Sequence
(BLAST)

001: MSMAAAAAAI TAVLLAALMA RASAAAAGRV WADEEKGAHN GTARRQVTYD GRSLMLDGAR RMLFSGDIHY PRSTPEMWPR LIESAREGGL DVIQTYVFWN
101: VHEPIQGQYN FEGRYDLVKF IREIHAQGLY VSLRVGPFIE AEWKYGGLPF WLRGVPNITF RCDNEPYKVH MQKFVAKIVN MMKDEKLYYP QGGPIIISQI
201: ENEYKLVEGA FHSRGPPYVR WAAAMAVNLQ TGVPWMMCKQ DDAPDPIINT CNGLICGETF IGPNKPNKPA LWTENWTSRY PLYGHDPRYR SPADIAFAVA
301: LFIARKKGSF VSYYMYHGGT NFGRFASSYV TTSYYDGAPL DEYGLIWQST WSHLRELHAA VKQSEEPLLS GSYSTYSFGE QQEGHVFETE SNCVAFLVNL
401: DKHKTSNIQF GEASFQLAPK SISILSSCRR VVFETAKVNA QHGLRTAQVV QSLNNVDSWK IFKEPIPLAI NNTTHIGHRF FEHLSTTKDE TDYLWYLTRY
501: DYRSNGDTQL VLNVESQAHV LHAYINNDYV GSVHGSHDGP RNIILKTPIT LRKGQNSISL LSVMVGSPDS GAYMERRIFG VRKVSIQQGD HKSHSLNNEL
601: WKHQIGLSGE MNNIYTPEGS SRAQWTAINK SMHLPLIWYK TTFDTPWGND PVTLNLSSMG KGEVWINGES IGRYWASFKT PSGQPSQSLY HVPQYFLKPR
701: ENTLVLMEEM GGDPLQISVN TMSVTRVYSS VNELSTPSLL SRRKHPAVRL RCQQGKRITD IEFASYGNPA EDCRSSSRSC LGSCHAETTE FVVKDACLGR
801: RKCAIPVRPA KFGGDPCPGI EKSLSVVASC G

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.