CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	89.95	91.71
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.87	79.0
TraesCS1D01G267600.2	Wheat	endoplasmic reticulum, extracellular, vacuole	77.39	78.9
TraesCS1B01G278400.1	Wheat	plastid	77.63	78.76
HORVU1Hr1G065290.7	Barley	vacuole	77.15	78.47
Os05t0428100-00	Rice	golgi, vacuole	75.36	77.68
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	33.85	61.39
GSMUA_Achr11P...	Banana	golgi, vacuole	57.89	59.24
KRH40964	Soybean	golgi, vacuole	49.04	58.24
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	48.09	57.84
KRH53958	Soybean	golgi, vacuole	49.28	57.46
KRH63978	Soybean	golgi, vacuole	49.16	57.32
PGSC0003DMT400023852	Potato	extracellular	41.87	55.64
VIT_18s0001g02220.t01	Wine grape	vacuole	54.07	55.6
Solyc11g018490.1.1	Tomato	cytosol	50.12	55.5
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	47.97	55.39
KRH53267	Soybean	golgi, vacuole	46.05	55.24
KRH64633	Soybean	vacuole	45.93	55.17
Bra029200.1-P	Field mustard	vacuole	47.49	55.14
AT5G63800.1	Thale cress	vacuole	47.25	55.01
CDY39845	Canola	vacuole	47.13	54.72
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	53.59	54.57
Bra024237.1-P	Field mustard	vacuole	32.66	54.49
CDX84445	Canola	vacuole	46.17	53.61
CDY31349	Canola	vacuole	47.49	53.58
AT1G77410.3	Thale cress	golgi, vacuole	51.91	52.93
CDY43756	Canola	cytosol, nucleus, peroxisome	31.34	51.37
OQU87043	Sorghum	golgi, vacuole	43.78	44.26
EES06516	Sorghum	mitochondrion, plastid	38.64	43.65
EER92805	Sorghum	vacuole	43.54	43.23
EER88554	Sorghum	golgi, vacuole	37.44	43.17
KXG25431	Sorghum	golgi	43.78	43.16
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	42.58	42.23
EER92534	Sorghum	endoplasmic reticulum, golgi	43.42	42.21
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	40.91	40.86
EES16726	Sorghum	extracellular	43.54	39.44
EES03081	Sorghum	extracellular	37.8	38.07

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1B6P8K2	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	EnsemblPlants:KXG22057	ProteinID:KXG22057	ProteinID:KXG22057.2	InterPro:Lectin_gal-bd_dom
PFAM:PF01301	PFAM:PF02140	PFAM:PF13364	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PFscan:PS51257	PANTHER:PTHR23421	PANTHER:PTHR23421:SF118	EnsemblPlantsGene:SORBI_3009G146500	SUPFAM:SSF49785	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B42608F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:50348564..50358054

Molecular Weight (calculated)

93222.2 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.287

Length

836 amino acids

Sequence
(BLAST)

001: MAVAKEVVVA VVTLLLGLTA CTTTSSSSSS AAAAGRSARR WREEDCGGGV RGEVTYDHRA LVLNGTRRML FAGEMHYPRS TPEMWPKLIA KAKEGGLDMI
101: QTYVFWNVHE PVQGQYNFEG RYDLVRFIKE IQAQGLYVSL RIGPFIESEW KYGGFPFWLH DVPNITFRSD NEPFKQHMQR FVTDIVNMMK HEGLYYPQGG
201: PIITSQIENE YQMVEHAFGS SGQRYVSWAA AMAVDRQTGV PWTMCKQNDA PDPVINTCNG LICGETFVGP NSANKPALWT ENWTSRYLIY GNDTKLRSPE
301: DIAFAVVYFI ARKNGSYVSY YMYHGGTNFG RFASSYVTTS YYDAAPLDEY GLIWQPTWGH LRELHAAVKQ SSEPLLFGTY SYLSLGQEQE AHIFETESQC
401: VAFLVNFDRH HISEVVFRNI SLELAPKSIS ILSDCKRVVF ETAKVTAQHG SRTAEEVQSF SDINTWTAFK EPIPQDVSKA MYSGNRLFEH LSTTKDDTDY
501: LWYIVGYEYT PSDDDQPVLI NVESRAHILH AFVNNAYVGR IHGSHGGPAN IILNTNISLK EGPNTISLLS AMVGSPDSGA HMERRVFGLQ KVSIQQGQEP
601: ENLLNNELWG YQVGLFGERN SIYTQEGSKS VEWTTIYNLA YSPLTWYKTT FSTPAGNDAV TLNLTGMGKG EVWVNGESIG RYWVSFKAPS GNPSQSLYHI
701: PRQFLNPQDN ILVLFEEMGG NPQQITVNTV SVTRVCVNVN ELSAPSLQYK NKEPAVDLRC QEGKQISAIE FASYGNPIGD CKKIRFGSCH AGSSESVVKQ
801: ACLGKSGCSI PITPIKFGGD PCPGIKKSLL VVANCR

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.