CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 7
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028474_P002	Maize	vacuole	94.53	90.53
TraesCS4A01G083700.3	Wheat	extracellular	84.19	84.88
TraesCS4B01G220500.1	Wheat	golgi	83.14	83.82
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	84.42	83.54
TraesCS4D01G220800.2	Wheat	vacuole	83.6	82.93
Os03t0255100-01	Rice	extracellular	86.05	77.41
KRH22910	Soybean	nucleus	69.19	70.83
KRH29942	Soybean	extracellular, golgi, vacuole	67.91	69.69
KRH26431	Soybean	golgi, vacuole	67.33	68.93
VIT_06s0004g03020.t01	Wine grape	extracellular	67.79	68.91
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	69.65	68.77
KRG89008	Soybean	nucleus	65.81	67.7
CDY15749	Canola	golgi, vacuole	66.4	67.65
CDY31204	Canola	golgi, vacuole	66.28	67.54
Bra011946.1-P	Field mustard	golgi, vacuole	66.28	67.46
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	66.74	67.37
Bra000493.1-P	Field mustard	golgi, vacuole	66.05	67.3
CDY04567	Canola	golgi, vacuole	66.4	67.18
CDX83288	Canola	golgi, vacuole	65.47	66.63
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	64.42	65.95
PGSC0003DMT400020941	Potato	extracellular	65.23	65.85
Solyc11g069270.1.1	Tomato	extracellular	65.12	65.73
EER88554	Sorghum	golgi, vacuole	46.16	54.76
OQU87043	Sorghum	golgi, vacuole	51.98	54.05
EER92805	Sorghum	vacuole	52.67	53.8
EES06516	Sorghum	mitochondrion, plastid	46.05	53.51
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	51.51	52.55
EES16726	Sorghum	extracellular	50.58	47.13
EES03081	Sorghum	extracellular	45.35	46.99
KXG22057	Sorghum	vacuole	42.21	43.42
KXG25431	Sorghum	golgi	40.12	40.68
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	38.37	39.43

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:8078836	UniProt:C5WQU7	EnsemblPlants:EER92534
ProteinID:EER92534	ProteinID:EER92534.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	MetaCyc:PWY-6807
EnsemblPlantsGene:SORBI_3001G433200	SUPFAM:SSF49785	SUPFAM:SSF51445	unigene:Sbi.6426	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI0001A826B2	RefSeq:XP_002465536.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:71174410..71180919

Molecular Weight (calculated)

92957.5 Da

IEP (calculated)

5.402

GRAVY (calculated)

-0.139

Length

860 amino acids

Sequence
(BLAST)

001: MAATARLLPA FADAAAAAAA LLVVVLCLAG GARATNVTYD HRALVIDGVR RVLVSGSIHY PRSTPDMWPG IIQKAKDGGL DVIETYVFWD IHEPVRGQYD
101: FEGRKDLAAF VKTVADAGLY VHLRIGPYVC AEWNYGGFPL WLHFIPGIKF RTDNEPFKTE MQRFTAKVVD TMKGAGLYAS QGGPIILSQI ENEYGNIDSA
201: YGAAGKAYMR WAAGMAISLD TGVPWVMCQQ TDAPDPLINT CNGFYCDQFT PNSAAKPKMW TENWSGWFLS FGGAVPYRPV EDLAFAVARF YQRGGTFQNY
301: YMYHGGTNLD RSSGGPFIAT SYDYDAPIDE YGLVREPKWG HLRDVHKAIK LCEPALIATD PSYTSLGQNA EAAVYKTGSV CAAFLANIDG QSDKTVTFNG
401: RMYRLPAWSV SILPDCKNVV LNTAQINSQV TSSEMRYLES SNMASDGSFI TPELAVSGWS YAIEPVGITK DNALTKAGLM EQINTTADAS DFLWYSTSIT
501: VKGDEPYLNG SQSNLVVNSL GHVLQVYING KIAGSAQGSA SSSLISWQKP IELVPGKNKI DLLSATVGLS NYGAFFDLVG AGITGPVKLS GTNGALDLSS
601: AEWTYQIGLR GEDLHLYDPS EASPEWVSAN AYPINQPLIW YKTKFTPPAG DDPVAIDFTG MGKGEAWVNG QSIGRYWPTN LAPQSGCVNS CNYRGSYNSN
701: KCLKKCGQPS QTLYHVPRSF LQPGSNDIVL FEQFGGDPSK ISFVIRQTGS VCAQVSEEHP AQIDSWNSSQ QTMQRYGPEL RLECPKDGQV ISSIKFASFG
801: TPSGTCGSYS HGECSSTQAL SVVQEACIGV SSCSVPVSSN YFGNPCTGVT KSLAVEAACS

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.