Factsheet for GSMUA_Achr4P22060_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	75.24	72.56
KRH22910	Soybean	nucleus	68.57	68.57
KRH29942	Soybean	extracellular, golgi, vacuole	67.86	68.02
KRH26431	Soybean	golgi, vacuole	67.38	67.38
KRG89008	Soybean	nucleus	66.9	67.22
VIT_06s0004g03020.t01	Wine grape	extracellular	67.62	67.14
CDY15749	Canola	golgi, vacuole	66.55	66.23
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	67.14	66.2
Bra000493.1-P	Field mustard	golgi, vacuole	66.31	66.0
CDY31204	Canola	golgi, vacuole	66.07	65.76
CDX83288	Canola	golgi, vacuole	65.95	65.56
Bra011946.1-P	Field mustard	golgi, vacuole	65.95	65.56
CDY04567	Canola	golgi, vacuole	66.07	65.29
PGSC0003DMT400020941	Potato	extracellular	65.71	64.79
EER92534	Sorghum	endoplasmic reticulum, golgi	65.95	64.42
TraesCS4A01G083700.3	Wheat	extracellular	65.24	64.24
Solyc11g069270.1.1	Tomato	extracellular	65.12	64.2
TraesCS4B01G220500.1	Wheat	golgi	64.52	63.54
TraesCS4D01G220800.2	Wheat	vacuole	65.48	63.44
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	65.6	63.41
Zm00001d028474_P002	Maize	vacuole	66.9	62.58
GSMUA_Achr7P08970_001	Banana	vacuole	50.71	58.36
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	50.48	57.61
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	50.24	57.34
GSMUA_Achr7P08940_001	Banana	vacuole	49.88	57.24
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	50.0	57.22
Os03t0255100-01	Rice	extracellular	65.12	57.22
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	53.1	54.13
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	54.17	53.34
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	53.81	52.07
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	46.9	51.84
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	48.1	51.47
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	37.5	50.89
GSMUA_Achr4P06620_001	Banana	cytosol	38.57	50.31
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	50.0	49.94
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	31.19	49.43
GSMUA_Achr2P16780_001	Banana	plastid	49.29	49.23
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	51.31	49.09
GSMUA_Achr11P...	Banana	golgi, vacuole	45.71	47.0
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	47.5	44.43
GSMUA_AchrUn_...	Banana	extracellular, vacuole	42.38	43.63
GSMUA_Achr1P14790_001	Banana	vacuole	42.62	43.39
GSMUA_Achr1P26480_001	Banana	vacuole	41.67	43.05
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	42.26	42.31

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr4G22060_001	EnsemblPlants:GSMUA_Achr4P22060_001	EnsemblPlants:GSMUA_Achr4T22060_001
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	UniProt:M0SR19	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000296A972	SEG:seg	:	:

Description

Beta-galactosidase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr4G22060_001]

Coordinates

chr4:-:22428900..22434204

Molecular Weight (calculated)

92547.1 Da

IEP (calculated)

6.312

GRAVY (calculated)

-0.206

Length

840 amino acids

Sequence
(BLAST)

001: MAAHPTLPSP VSTSLLLLLL LLLSCCSELC SAATVSYDHR AVVIDGKRRV LISGSIHYPR STPEMWPDLI QKSKDGGLDV IETYVFWNLH EPVQGQYDFG
101: GRKDLVKFIK TVAAAGLYVH LRIGPYVCAE WNYGGFPVWL HFIPNIKFRI DNDPFKNEMQ KFTTKIVDMM KQEMLFASQG GPIILSQIEN EYGNVEQYYG
201: PTAKSYIDWA ASMATSLNVS VPWVMCQQDN APDPIINTCN GFYCDNFKPN SDKKPKMWTE NWSGWFLSFG GGVPYRPVED LAFAVARFFQ RGGTFQNYYM
301: YHGGTNFGRT SGGPFIATSY DYDSPIDEYG LLRQPKWGHL RDLHKVIKQC EEALVATDPT YTSLGKNLEA HVYRTSSGRC VAFLANIDDH SDATVTFNGK
401: PYQLPAWSVS ILPDCQSVAF NTAKAADEST GSSEISESEW KFFTEPIGSI NSTFKNVGLL EQINTTADSS DYLWYSISID VIGNEPFLFN GTQTTLHVDS
501: LGHVLHVFVN GKLSGHMLFL NQGSNADASF KLENVITLSS GQNRIDLLSA TVGLKNYGQF FDLSGAGITG VILKNHNATR DLSSSQWTYQ IGLKGEQLAL
601: HDNTQNSTWM SLSSLPKNQP LTWYMTYFDA PEHDDPVAID FTGMGKGEAW VNGHSIGRYW PTYTSPPSGC VQSCDYRGPF SGSKCVRNCG QPSQSLYHVP
701: RSLIQQGNTN RLVLFEEVGG DPTLVSFALR AAGSLCAHVS QSHPPPVDAV NTAQKKDAVL HLECPHSDRV ISSVKFASFG TPHGTCGSYS HGNCSSTTAL
801: AILQQACIGV RSCDVKVSTE VFGDPCRDVV KSLAVEASCS

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.