Factsheet for Bra000493.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

nucleus 1
golgi 6
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31204	Canola	golgi, vacuole	98.46	98.46
Bra011946.1-P	Field mustard	golgi, vacuole	89.69	89.59
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	88.03	87.21
KRH22910	Soybean	nucleus	72.75	73.1
KRH29942	Soybean	extracellular, golgi, vacuole	72.39	72.91
KRH26431	Soybean	golgi, vacuole	71.56	71.9
VIT_06s0004g03020.t01	Wine grape	extracellular	72.04	71.87
KRG89008	Soybean	nucleus	70.97	71.65
PGSC0003DMT400020941	Potato	extracellular	69.31	68.66
Solyc11g069270.1.1	Tomato	extracellular	68.96	68.31
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	70.26	68.08
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	66.0	66.31
EER92534	Sorghum	endoplasmic reticulum, golgi	67.3	66.05
TraesCS4A01G083700.3	Wheat	extracellular	66.11	65.42
TraesCS4B01G220500.1	Wheat	golgi	65.52	64.83
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	66.35	64.44
TraesCS4D01G220800.2	Wheat	vacuole	65.76	64.01
Zm00001d028474_P002	Maize	vacuole	67.77	63.7
Os03t0255100-01	Rice	extracellular	66.47	58.68
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	46.8	55.48
Bra036334.1-P	Field mustard	golgi, vacuole	47.39	54.79
Bra027403.1-P	Field mustard	golgi, vacuole	54.38	54.71
Bra014036.1-P	Field mustard	plastid	46.09	54.63
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	47.27	54.51
Bra006850.1-P	Field mustard	golgi, vacuole	46.56	54.43
Bra019120.1-P	Field mustard	golgi, vacuole	45.62	54.07
Bra011677.1-P	Field mustard	golgi, vacuole	54.62	53.86
Bra021506.1-P	Field mustard	vacuole	54.15	53.08
Bra035634.1-P	Field mustard	golgi, vacuole	45.26	52.91
Bra021814.1-P	Field mustard	plastid	54.38	51.4
Bra024237.1-P	Field mustard	vacuole	29.98	50.5
Bra024238.1-P	Field mustard	golgi, vacuole	44.19	50.34
Bra002325.1-P	Field mustard	golgi, vacuole	48.46	49.34
Bra029200.1-P	Field mustard	vacuole	40.64	47.64
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	40.88	47.13
Bra003128.1-P	Field mustard	extracellular, vacuole	37.91	45.26
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	16.0	44.41
Bra011577.1-P	Field mustard	vacuole	40.05	40.0
Bra001991.1-P	Field mustard	golgi, vacuole	38.39	39.9
Bra017687.1-P	Field mustard	vacuole	39.57	39.57
Bra013052.1-P	Field mustard	golgi, vacuole	39.45	39.36
Bra033571.1-P	Field mustard	cytosol	40.05	35.36

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra000493	EnsemblPlants:Bra000493.1	EnsemblPlants:Bra000493.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	UniProt:M4C8G5	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI000253FFB3	:	:	:	:	:

Description

AT2G28470 (E=0.0) BGAL8 | BGAL8 (beta-galactosidase 8); beta-galactosidase/ catalytic/ cation binding / sugar binding

Coordinates

chrA03:+:11392705..11397094

Molecular Weight (calculated)

92196.1 Da

IEP (calculated)

7.805

GRAVY (calculated)

-0.223

Length

844 amino acids

Sequence
(BLAST)

001: MVRVRKIEIV SCLLLQIVVA ATAANVTYDH RALVIDGKRK ILISGSIHYP RSTPEMWPDL IQKSKDGGLD VIETYVFWNG HEPHKNKYNF EGRYDLVKFV
101: KLVAKAGLYV HLRIGPYACA EWNYGGFPVW LHFIPGIKFR TDNEPFKAEM QRFTAKIVDL MKQEKLYASQ GGPIILSQIE NEYGNVDSSY GAAGKSYMKW
201: SASMALSLDT GVPWNMCQQG DAPDPIINTC NGFYCDQFTP NSNNKPKMWT ENWSGWFLGF GDPTPYRPVE DLAFAVAIFY QRSGTFQNYY MYHGGTNFER
301: TSGGPLISTS YDYDAPIDEY GLVRQPKWGH LRDLHKAIKL CEDALLATDP TVTSLGSNLV ASEYKTSSGL CAAFLANIGT ESDATVTFNG NSYHLPAWSI
401: SILPDCKNVA FNTAKINAAT ESTTFARQAL KPNADSSEEL GSQWSYIKEP IGISKADAFV KPGLLEQINT TADESDYLWY SLRMDIKGDE TFLDEGSKAV
501: LHVQSIGQVV YAFINGKLAG SGNGKQKISL DIPINLVTGK NTIDLLSVTV GLANYGAFFD LFGAGITGPV TLKSAKSGSS IDLSSQQWTY QVGLKGEDTN
601: LGSGDSSEWV SKSPLPTMQP LVWYKTTFDA PSGSDPVAID FTGTGKGIAW VNGQSIGRYW PTSIARNNGC TDLCNYRGSY SSNKCLKNCG KPSQTLYHVP
701: RSWIKPSGNT LVLLEEMGGD PTKISFATKQ TGSSLCLTVS QSHPAPVDSW ASDSKILNRT SPVLSLKCPV STHVITSINF ASFGTPTGTC GSFSHGRCNS
801: PRSLSIVRKA CVGSRSCKVE VSTRVFGDPC RSLAKSLAVE ASCS

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.