Factsheet for Bra027403.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13750.1	Bra024839.1-P	AT2G01950.1	19000166
AT3G13750.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97513	Canola	golgi, vacuole	99.88	99.76
AT3G13750.1	Thale cress	golgi, vacuole	96.66	95.75
Bra021506.1-P	Field mustard	vacuole	95.95	93.5
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	80.21	80.02
KRH10007	Soybean	nucleus	79.74	79.64
KRH23324	Soybean	vacuole	79.02	78.83
KRH44153	Soybean	nucleus	79.02	78.65
KRH47126	Soybean	nucleus	78.9	78.34
Solyc03g121540.2.1	Tomato	nucleus	77.71	77.8
PGSC0003DMT400006654	Potato	golgi, vacuole	77.12	77.21
PGSC0003DMT400083896	Potato	extracellular	76.64	77.01
Solyc12g044880.1.1	Tomato	golgi, vacuole	76.04	76.41
PGSC0003DMT400012359	Potato	golgi, vacuole	76.4	76.31
Solyc06g062580.2.1	Tomato	nucleus	76.4	76.22
GSMUA_Achr7P08970_001	Banana	vacuole	64.48	74.11
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	63.05	71.88
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	62.34	71.25
GSMUA_Achr7P08940_001	Banana	vacuole	62.1	71.17
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	61.98	70.65
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	69.13	70.39
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	60.79	69.67
OQU87043	Sorghum	golgi, vacuole	68.53	69.53
Os01t0580200-01	Rice	golgi, vacuole	68.06	69.04
Zm00001d044290_P005	Maize	golgi, vacuole	68.06	68.8
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	58.28	68.68
TraesCS3A01G208600.1	Wheat	plastid	67.82	68.14
TraesCS3D01G211500.2	Wheat	golgi, vacuole	67.58	67.9
TraesCS6A01G185400.1	Wheat	golgi, vacuole	58.52	67.82
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	57.93	67.69
TraesCS7D01G359500.1	Wheat	golgi	57.81	67.64
Zm00001d046357_P001	Maize	extracellular	58.16	67.59
HORVU3Hr1G050450.12	Barley	golgi, vacuole	66.87	67.51
TraesCS3B01G235100.1	Wheat	golgi, vacuole	67.34	67.5
TraesCS6D01G172400.1	Wheat	golgi, vacuole	58.28	67.45
Os02t0219200-01	Rice	peroxisome, vacuole	40.17	67.4
TraesCS6B01G214100.1	Wheat	golgi, vacuole	58.16	67.31
Bra019120.1-P	Field mustard	golgi, vacuole	56.97	67.13
EER88554	Sorghum	golgi, vacuole	57.93	67.03
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	57.33	66.99
Os06t0573600-01	Rice	plasma membrane, vacuole	56.85	66.71
Bra006850.1-P	Field mustard	golgi, vacuole	57.21	66.48
EES06516	Sorghum	mitochondrion, plastid	58.16	65.95
Bra036334.1-P	Field mustard	golgi, vacuole	57.33	65.89
Bra014036.1-P	Field mustard	plastid	55.42	65.31
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	58.05	65.19
Bra035634.1-P	Field mustard	golgi, vacuole	56.02	65.1
HORVU6Hr1G039490.6	Barley	plastid	58.76	64.53
Bra011677.1-P	Field mustard	golgi, vacuole	64.0	62.73
GSMUA_Achr2P16780_001	Banana	plastid	61.86	61.71
Zm00001d053585_P002	Maize	plastid	56.85	57.54
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	19.79	54.61
Bra000493.1-P	Field mustard	golgi, vacuole	54.71	54.38
Bra011946.1-P	Field mustard	golgi, vacuole	54.47	54.08
Bra024238.1-P	Field mustard	golgi, vacuole	46.84	53.04
Bra024237.1-P	Field mustard	vacuole	29.56	49.5
Bra002325.1-P	Field mustard	golgi, vacuole	48.39	48.97
Bra029200.1-P	Field mustard	vacuole	41.72	48.61
Bra021814.1-P	Field mustard	plastid	51.01	47.93
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	39.21	44.95
Bra003128.1-P	Field mustard	extracellular, vacuole	37.43	44.41
Bra001991.1-P	Field mustard	golgi, vacuole	41.95	43.35
Bra011577.1-P	Field mustard	vacuole	42.55	42.25
Bra013052.1-P	Field mustard	golgi, vacuole	42.31	41.96
Bra017687.1-P	Field mustard	vacuole	42.19	41.94
Bra033571.1-P	Field mustard	cytosol	41.72	36.61

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra027403	EnsemblPlants:Bra027403.1	EnsemblPlants:Bra027403.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	UniProt:M4EF41	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002547F8F	SEG:seg	:	:	:

Description

AT3G13750 (E=0.0) BGAL1 | BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding

Coordinates

chrA05:-:20724170..20728572

Molecular Weight (calculated)

92842.3 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.283

Length

839 amino acids

Sequence
(BLAST)

001: MKNVAIAAAS ALFLLGFLVS SVSASVSYDS RAITINGERR ILISGSIHYP RSTPEMWPDL IRKAKEGGLD VIQTYVFWNG HEPSPGKYYF EGNYDLVKFV
101: KLVQQSGLYL HLRIGPYVCA EWNFGGFPVW LKYVPGISFR TDNGPFKAQM QRFTTKIVNM MKAERLFESQ GGPIILSQIE NEYGPMEYEL GAPGRSYTNW
201: AAKMAVGLGT GVPWVMCKQD DAPDPIINAC NGFYCDYFSP NKAYKPKMWT EAWTGWFTKF GGPVPYRPAE DMAFSVARFI QKGGSFINYY MYHGGTNFGR
301: TAGGPFIATS YDYDAPLDEY GLERQPKWGH LKDLHRAIKL CEPALVSGEP TRMSLGNYQE AHVYKSKSGA CSAFLANYNP RSYAKVSFGS NHYNLPPWSI
401: SILPDCKNTV YNTARVGAQT SRMKMVEVPV HGGLSWQAYN EDPSTYIDES FTMVGLVEQI NTTRDTSDYL WYMTDVKIDS NEGFLRTGDL PTLTVLSAGH
501: AMHVFINGQL SGSAYGSLDS PKLTFRKGVN LRAGFNKIAI LSIAVGLPNV GPHFETWNAG VLGPVNLNGL NGGRRDLSWQ KWTYKVGLRG ESLSLHSLGG
601: SSSVEWAEGA YVAQKQPLTW YKTTFSAPAG DSPLAVDMGS MGKGQIWING QSVGRHWPAY KAVGSCGECS YTGTFNENKC LRNCGEASQR WYHVPRSWLK
701: PTGNLLVVFE EWGGDPNGIS LVRREVDSVC ADIYEWQSTL VNYQLHSSGK VNKPLHPKVH LQCGPGQKMT TVKFASFGTP EGTCGSYRQG SCHAHHSYDA
801: FNRLCVGQNW CSVTVAPEMF GGDPCPNVMK KLAVEAVCA

Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)

001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA

Arabidopsis Description

BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.