Factsheet for GSMUA_Achr7P08960_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13750.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08970_001	Banana	vacuole	92.53	93.29
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	92.93	92.93
GSMUA_Achr7P08940_001	Banana	vacuole	90.49	90.98
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	83.7	83.92
CDX76255	Canola	extracellular	12.64	72.66
GSMUA_Achr2P16780_001	Banana	plastid	83.02	72.65
Zm00001d046357_P001	Maize	extracellular	70.65	72.02
EER88554	Sorghum	golgi, vacuole	70.92	72.0
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	69.97	71.73
TraesCS6A01G185400.1	Wheat	golgi, vacuole	70.24	71.41
Os06t0573600-01	Rice	plasma membrane, vacuole	69.16	71.19
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	69.43	71.17
TraesCS7D01G359500.1	Wheat	golgi	69.29	71.13
CDX88594	Canola	golgi, vacuole	31.39	71.08
TraesCS6B01G214100.1	Wheat	golgi, vacuole	69.97	71.03
Os02t0219200-01	Rice	peroxisome, vacuole	47.96	70.6
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	64.27	70.6
TraesCS6D01G172400.1	Wheat	golgi, vacuole	69.29	70.34
Solyc12g008840.1.1	Tomato	extracellular	69.02	70.17
EES06516	Sorghum	mitochondrion, plastid	70.24	69.86
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	69.97	68.94
KRH37385	Soybean	nucleus	66.58	67.96
KRH12385	Soybean	vacuole	66.58	67.96
HORVU6Hr1G039490.6	Barley	plastid	70.52	67.93
CDX94367	Canola	mitochondrion	65.62	67.84
AT5G56870.1	Thale cress	vacuole	65.76	66.85
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	74.73	66.75
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	63.99	66.15
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	65.62	65.98
CDY11899	Canola	golgi, vacuole	64.67	65.93
Bra006850.1-P	Field mustard	golgi, vacuole	64.54	65.79
CDX95380	Canola	vacuole	64.4	65.2
CDX92753	Canola	golgi, vacuole	62.91	65.03
CDX89360	Canola	mitochondrion	61.68	64.95
CDY32919	Canola	golgi, vacuole	63.45	64.68
Bra035634.1-P	Field mustard	golgi, vacuole	63.32	64.54
Bra019120.1-P	Field mustard	golgi, vacuole	62.36	64.47
CDY42755	Canola	vacuole	62.36	64.47
CDY20708	Canola	golgi, vacuole	63.18	64.4
AT4G26140.7	Thale cress	vacuole	65.49	64.01
CDY23637	Canola	golgi, vacuole	72.01	63.17
CDX76254	Canola	golgi, nucleus, vacuole	50.41	63.1
Bra027403.1-P	Field mustard	golgi, vacuole	71.88	63.05
CDX97513	Canola	golgi, vacuole	71.74	62.86
KRH10007	Soybean	nucleus	71.6	62.74
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	71.6	62.66
KRH44153	Soybean	nucleus	71.74	62.63
CDY51738	Canola	golgi, vacuole	71.33	62.57
KRH47126	Soybean	nucleus	71.6	62.37
CDY37486	Canola	golgi, vacuole	71.06	62.34
CDY70594	Canola	cytosol	35.05	62.02
KRH23324	Soybean	vacuole	70.79	61.95
Solyc03g121540.2.1	Tomato	nucleus	70.38	61.81
CDY69471	Canola	cytosol	34.92	61.78
PGSC0003DMT400006654	Potato	golgi, vacuole	70.24	61.69
AT3G13750.1	Thale cress	golgi, vacuole	70.92	61.63
AT3G52840.2	Thale cress	golgi, vacuole	65.35	61.59
Solyc12g044880.1.1	Tomato	golgi, vacuole	69.57	61.32
Bra021506.1-P	Field mustard	vacuole	71.47	61.09
Zm00001d053585_P002	Maize	plastid	68.75	61.04
PGSC0003DMT400083896	Potato	extracellular	69.16	60.96
VIT_11s0016g02200.t01	Wine grape	vacuole	68.89	60.65
PGSC0003DMT400012359	Potato	golgi, vacuole	69.16	60.6
Solyc06g062580.2.1	Tomato	nucleus	69.16	60.52
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	68.61	60.19
KRH02714	Soybean	golgi, vacuole	68.34	59.95
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	65.08	56.15
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	64.54	54.72
GSMUA_Achr4P06620_001	Banana	cytosol	46.06	52.64
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	52.99	51.32
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	57.34	50.24
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	58.02	49.02
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	29.35	48.32
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	40.35	47.98
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	34.1	47.36
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	50.27	44.0
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	52.31	43.85
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	45.79	42.93
GSMUA_Achr11P...	Banana	golgi, vacuole	47.55	42.84
GSMUA_AchrUn_...	Banana	extracellular, vacuole	47.28	42.65
GSMUA_Achr1P14790_001	Banana	vacuole	47.01	41.94
GSMUA_Achr1P26480_001	Banana	vacuole	45.65	41.33
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	46.06	40.41
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	46.06	37.75

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr7G08960_001	EnsemblPlants:GSMUA_Achr7P08960_001
EnsemblPlants:GSMUA_Achr7T08960_001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979
UniProt:M0TFY4	PFAM:PF01301	PRINTS:PR00742	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0002955CB4	SEG:seg	:	:

Description

Beta-galactosidase [Source:GMGC_GENE;Acc:GSMUA_Achr7G08960_001]

Coordinates

chr7:-:7334980..7340156

Molecular Weight (calculated)

81700.0 Da

IEP (calculated)

8.133

GRAVY (calculated)

-0.209

Length

736 amino acids

Sequence
(BLAST)

001: MSLELITLGC GRGLSTLLLL AVALVVVSSP WHSSPVDASV SYDHKAIIVN GQRRILISGS IHYPRSTPEM WPDLIQKAKD GGLDVIQTYV FWNGHEPSPG
101: QYYFGGNYDL VRFIKLVKQA GLYVHLRIGP YVCAEWNFGG FPVWLKYVPG ITFRSDNGPF KAAMAKFTEK IVAMMKSEGL FESQGGPIIL SQQIENEYSI
201: QEYYDGAAAK NYLSWAAQMA VGLNTGVPWV MCKQDDAPDP VINACNGFYC DYFSPNKPYK PTMWTEAWTG WFTGFGGPVP HRPVQDMAFA VARFIAKGGS
301: FVNYYMYHGG TNFGRTAGGP FIATSYDYDA PIDEYGLLRQ PKWGHLTDLH KAIKSCEPAL VSGDPTVTNL GKYQEAHVYR SKSGACAAFL SNFNSRSYAP
401: VTFNGMKYHI PAWSVSILPD CKTAVFNTAK VGAPTSQINM TWVGGFSWES FSEDTHSLRD KSFSKDGLVE QISMTWDRTD YLWYTTYVNI DSNEQFLKNG
501: RYPFLTVMSA GHSMHVFING ELAGTVYGSL DNPKIRFTGN VKLWAGSNKI SILSVAVGLP NIGNHFETWN AGVLGPVTLD GLNEGKRDLS SQKWIYQIGL
601: RGESLSIYTL SGSSSVKWGG ASTRQPLTWY KAFFNAPAGN EPLALDMSSM GKGQIWINGQ SIGRYWPAYK AYGSCDWCDY RGTYNEKKCQ TNCGEPSQKW
701: YHVPRAWLNP TGNLLVVFEE WGGDPTGISL VKRVAL

Best Arabidopsis Sequence Match ( AT4G26140.1 )
(BLAST)

001: MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV
101: KFIKVVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS QIENEYGPIE WEIGAPGKAY
201: TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN
301: FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS
401: VSILPDCKTE YYNTAKVQVR TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI SPDEKFLTGE DPLLTIGSAG
501: HALHVFVNGQ LAGTAYGSLE KPKLTFSQKI KLHAGVNKLA LLSTAAGLPN VGVHYETWNT GVLGPVTLNG VNSGTWDMTK WKWSYKIGTK GEALSVHTLA
601: GSSTVEWKEG SLVAKKQPLT WYKSTFDSPT GNEPLALDMN TMGKGQMWIN GQNIGRHWPA YTARGKCERC SYAGTFTEKK CLSNCGEASQ RWYHVPRSWL
701: KPTNNLVIVL EEWGGEPNGI SLVKRTAK

Arabidopsis Description

BGAL12beta-galactosidase 12 [Source:TAIR;Acc:AT4G26140]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.