Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g083070.1.1 Tomato cytosol 91.98 91.64
VIT_16s0098g01770.t01 Wine grape cytosol 47.33 45.42
CDY68387 Canola extracellular, plasma membrane, plastid 35.5 39.08
CDY29864 Canola cytosol, plasma membrane, plastid 35.11 36.8
KRH64430 Soybean nucleus 29.77 36.28
Bra019024.1-P Field mustard cytosol, plasma membrane, plastid 34.35 36.0
KRH53507 Soybean nucleus 32.06 35.9
AT4G27840.1 Thale cress plasma membrane 35.5 35.77
CDY27036 Canola extracellular, plasma membrane 34.73 35.69
Bra003092.1-P Field mustard extracellular 35.88 35.34
CDY50497 Canola extracellular 35.5 34.96
Bra022619.1-P Field mustard extracellular, plasma membrane 33.97 34.9
CDY19649 Canola extracellular 35.5 34.83
AT5G52990.1 Thale cress extracellular, plasma membrane 35.5 34.19
CDX96172 Canola extracellular 34.35 33.96
PGSC0003DMT400083261 Potato cytosol 27.86 30.17
Protein Annotations
EnsemblPlants:PGSC0003DMT400047728EnsemblPlantsGene:PGSC0003DMG400018551Gene3D:3.30.450.50GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016192InterPro:Longin-like_dom_sfPANTHER:PTHR21136PANTHER:PTHR21136:SF93
PGSC:PGSC0003DMG400018551SEG:segSUPFAM:SSF64356TMHMM:TMhelixUniParc:UPI0002955E29UniProt:M1BLC0
MapMan:22.7.6:::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400018551]
Coordinates
chr3:-:48215045..48216567
Molecular Weight (calculated)
29415.8 Da
IEP (calculated)
9.457
GRAVY (calculated)
-0.163
Length
262 amino acids
Sequence
(BLAST)
001: MIPDPNLVYY SCVAKGTTIL AEINSKDANL GSLALKCLEK TPPLHTFFSH TIRNRTYMFL IENPYVFFAI FDEKIDKSDG LAFLKGVEGA FRGVIERSSG
101: KKRLDKLNSH CFQGELNPVF HQLLDSSIVD EGSNSPRSEL DHGRSASLDS VKGKKIGSMP LLADAASSLK LKKKRFFGHF KKRNDEMCEK RVDVSDDGIR
201: LSRDFSVVMQ KNGLIHGEGG HQKAKKVWKK QVWVVLSLDL IVCTILFIVW LCVCRGFKCI DA
Best Arabidopsis Sequence Match ( AT4G27840.1 )
(BLAST)
001: MTSNQRMLFY SCIAKGTVIL AEFASKEEPG IEDLALRCIE NVPPHHSMIS HTVHKRTYAL IIDGLFSYFA ILDEVVAKSE SVWLFNRLKS ATESLMEDGS
101: TADSLDNPTQ HCLQSKLDPV FAEIAAIGGN HNKDLELEFG SPRSIAREIK SNNQSLDSSK GRKGGALMPL LGKPLRVLKN KKRLQTEAKS EGHWNEKKMD
201: LGGGGKGVRN GLIHDHHHRQ KAKQIWRKHV WIVLMFDLCI CLVLFGIWLW ICQGFQCIDG
Arabidopsis Description
PHYL2.1Phytolongin Phyl2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STP2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.