Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64430 | Soybean | nucleus | 75.64 | 82.33 |
| Solyc03g083070.1.1 | Tomato | cytosol | 36.32 | 32.32 |
| Bra022619.1-P | Field mustard | extracellular, plasma membrane | 35.04 | 32.16 |
| CDY27036 | Canola | extracellular, plasma membrane | 35.04 | 32.16 |
| PGSC0003DMT400047728 | Potato | cytosol | 35.9 | 32.06 |
| CDY68387 | Canola | extracellular, plasma membrane, plastid | 32.05 | 31.51 |
| CDX96172 | Canola | extracellular | 35.47 | 31.32 |
| Bra019024.1-P | Field mustard | cytosol, plasma membrane, plastid | 32.91 | 30.8 |
| CDY29864 | Canola | cytosol, plasma membrane, plastid | 32.91 | 30.8 |
| CDY50497 | Canola | extracellular | 34.62 | 30.45 |
| AT5G52990.1 | Thale cress | extracellular, plasma membrane | 35.04 | 30.15 |
| Bra003092.1-P | Field mustard | extracellular | 34.19 | 30.08 |
| VIT_16s0098g01770.t01 | Wine grape | cytosol | 34.62 | 29.67 |
| CDY19649 | Canola | extracellular | 33.33 | 29.21 |
| AT4G27840.1 | Thale cress | plasma membrane | 31.2 | 28.08 |
| KRH56413 | Soybean | cytosol | 20.94 | 17.63 |
| KRH62495 | Soybean | cytosol | 20.09 | 15.56 |
Protein Annotations
| EntrezGene:100780306 | MapMan:22.7.6 | Gene3D:3.30.450.50 | EMBL:ACUP02003470 | EnsemblPlantsGene:GLYMA_06G129500 | GO:GO:0000149 |
| GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0006906 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 |
| UniProt:I1KAT3 | EnsemblPlants:KRH53507 | ProteinID:KRH53507 | ProteinID:KRH53507.1 | InterPro:Longin-like_dom_sf | PANTHER:PTHR21136 |
| PANTHER:PTHR21136:SF93 | SUPFAM:SSF64356 | TMHMM:TMhelix | UniParc:UPI0002339CFE | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:10641679..10643002
Molecular Weight (calculated)
26709.2 Da
IEP (calculated)
9.311
GRAVY (calculated)
-0.315
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLKKEAMIS NPELIHYACI ARSETILGQH QSEKEPNMEA LAAQCVAQAP PNHTLFSHTV HNRTYTFLID PPFVFFAISH HSLLKSQTLP FLHCIRSSFR
101: QTLPPSSNNN HHFAPLSFQS QFTSIFQNAL HHHHHHHHHQ LQASPPPPPP PLNPPPQGLK KKKRPNDAPG TLDVSDDVVS LKPHHQPLNY NHSNKAKHVW
201: KKHVWVLLIL DLFVCAVLFV IWLWVCSGFK CMAY
101: QTLPPSSNNN HHFAPLSFQS QFTSIFQNAL HHHHHHHHHQ LQASPPPPPP PLNPPPQGLK KKKRPNDAPG TLDVSDDVVS LKPHHQPLNY NHSNKAKHVW
201: KKHVWVLLIL DLFVCAVLFV IWLWVCSGFK CMAY
001: MISNPSLLSY TCIAKGTVVL AEFVSRQEPG IEAIALRCIE NTPPHHSMFS HTVHKKTYTF AIDDDSFVYF SISDESMEKP ESFWVLNRLR SAIEDLIKDG
101: GSDVETLINP VSHCLQLKLD PVFAEIVGVV DLELLDMDLV GSPRSVARES RNPSIDSSKG RRAALMPLLG KPLKALKKKK RLHNEAKGGD SCEVGSIQEI
201: SEKNVDLCGN GNNGVLRKEL RNGLLSDHHH RQKAKQIWKK HVWVVLMFDF CICAVLFGIW LWICEGFQCI QG
101: GSDVETLINP VSHCLQLKLD PVFAEIVGVV DLELLDMDLV GSPRSVARES RNPSIDSSKG RRAALMPLLG KPLKALKKKK RLHNEAKGGD SCEVGSIQEI
201: SEKNVDLCGN GNNGVLRKEL RNGLLSDHHH RQKAKQIWKK HVWVVLMFDF CICAVLFGIW LWICEGFQCI QG
Arabidopsis Description
PHYL2.2Phytolongin Phyl2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVV3]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.