Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400044286 | Potato | cytosol | 91.44 | 91.2 |
VIT_05s0049g01740.t01 | Wine grape | cytosol | 63.9 | 66.02 |
KRG90360 | Soybean | cytosol | 35.29 | 55.46 |
KRH33620 | Soybean | cytosol | 56.15 | 53.71 |
AT2G33385.2 | Thale cress | cytosol | 51.34 | 51.34 |
CDY23743 | Canola | cytosol | 20.86 | 49.68 |
CDY17169 | Canola | cytosol | 49.2 | 48.68 |
Bra005500.1-P | Field mustard | cytosol, nucleus, peroxisome | 40.11 | 47.02 |
GSMUA_Achr1P00910_001 | Banana | cytosol | 41.98 | 45.51 |
TraesCS2A01G385000.1 | Wheat | cytosol, mitochondrion | 40.64 | 42.22 |
Os04t0512300-01 | Rice | cytosol | 41.18 | 41.85 |
TraesCS2B01G402000.2 | Wheat | cytosol, mitochondrion | 40.11 | 41.67 |
TraesCS2D01G381700.2 | Wheat | cytosol, mitochondrion | 39.57 | 41.11 |
EES12487 | Sorghum | nucleus | 41.18 | 39.49 |
CDY37726 | Canola | cytosol | 17.65 | 38.37 |
Solyc11g068610.1.1 | Tomato | cytosol, mitochondrion | 29.68 | 33.84 |
Zm00001d003039_P001 | Maize | nucleus | 33.69 | 30.66 |
Protein Annotations
MapMan:20.2.2.1.4 | Gene3D:3.30.1460.20 | InterPro:ARPC2 | InterPro:ARPC2/4 | GO:GO:0003674 | GO:GO:0003779 |
GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005885 | GO:GO:0008150 | GO:GO:0009987 |
GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030041 | GO:GO:0030833 | GO:GO:0034314 | GO:GO:0051015 |
InterPro:IPR034666 | UniProt:K4CW81 | PFAM:PF04045 | PANTHER:PTHR12058 | PANTHER:PTHR12058:SF1 | SUPFAM:SSF69645 |
EnsemblPlantsGene:Solyc09g090550.2 | EnsemblPlants:Solyc09g090550.2.1 | UniParc:UPI000276AD87 | : | : | : |
Description
Arp2/3 complex 34 kDa subunit [Source:UniProtKB/TrEMBL;Acc:K4CW81]
Coordinates
chr9:+:70040852..70045650
Molecular Weight (calculated)
43626.4 Da
IEP (calculated)
10.409
GRAVY (calculated)
-0.380
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MARFERASPA LKEILLRLYR DERAIDADHH LHEFGSIEYY IQSLVSDPDH TYLSIATPIL SQAFLVSTRL SRYTIQKVKA ISAEVVEIVE PPKEGYQLTI
101: RLNFGRMPHG KEAIKMITDI AAVQGVILSS QLEEMLMNVN SQDVAQGMYK PIKLVYHPRE PFYVIKQPQK ITAVFPMRFK EKTDVIIATT FFQELMDVAN
201: TKACAKAPHC IWSPIPPPEL RGEAIEDLST NGGFVSFDIT SRHIEGKRLD KTVWNLLNFY AFVKNHVKTT RGFIQRRMRT CLQSLVEVLQ KTEPQDEQQS
301: KEVKGYKHMK KLVKFTKFKI IRYRSDFTSK LKRIRSRLKI HGFNRFRRKW LTFPIFSSKT KYRKLEKDIS LQHN
101: RLNFGRMPHG KEAIKMITDI AAVQGVILSS QLEEMLMNVN SQDVAQGMYK PIKLVYHPRE PFYVIKQPQK ITAVFPMRFK EKTDVIIATT FFQELMDVAN
201: TKACAKAPHC IWSPIPPPEL RGEAIEDLST NGGFVSFDIT SRHIEGKRLD KTVWNLLNFY AFVKNHVKTT RGFIQRRMRT CLQSLVEVLQ KTEPQDEQQS
301: KEVKGYKHMK KLVKFTKFKI IRYRSDFTSK LKRIRSRLKI HGFNRFRRKW LTFPIFSSKT KYRKLEKDIS LQHN
001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD
Arabidopsis Description
ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.