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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400044286 Potato cytosol 91.44 91.2
VIT_05s0049g01740.t01 Wine grape cytosol 63.9 66.02
KRG90360 Soybean cytosol 35.29 55.46
KRH33620 Soybean cytosol 56.15 53.71
AT2G33385.2 Thale cress cytosol 51.34 51.34
CDY23743 Canola cytosol 20.86 49.68
CDY17169 Canola cytosol 49.2 48.68
Bra005500.1-P Field mustard cytosol, nucleus, peroxisome 40.11 47.02
GSMUA_Achr1P00910_001 Banana cytosol 41.98 45.51
TraesCS2A01G385000.1 Wheat cytosol, mitochondrion 40.64 42.22
Os04t0512300-01 Rice cytosol 41.18 41.85
TraesCS2B01G402000.2 Wheat cytosol, mitochondrion 40.11 41.67
TraesCS2D01G381700.2 Wheat cytosol, mitochondrion 39.57 41.11
EES12487 Sorghum nucleus 41.18 39.49
CDY37726 Canola cytosol 17.65 38.37
Solyc11g068610.1.1 Tomato cytosol, mitochondrion 29.68 33.84
Zm00001d003039_P001 Maize nucleus 33.69 30.66
Protein Annotations
MapMan:20.2.2.1.4Gene3D:3.30.1460.20InterPro:ARPC2InterPro:ARPC2/4GO:GO:0003674GO:GO:0003779
GO:GO:0005198GO:GO:0005200GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005856GO:GO:0005885GO:GO:0008150GO:GO:0009987
GO:GO:0015629GO:GO:0016043GO:GO:0030041GO:GO:0030833GO:GO:0034314GO:GO:0051015
InterPro:IPR034666UniProt:K4CW81PFAM:PF04045PANTHER:PTHR12058PANTHER:PTHR12058:SF1SUPFAM:SSF69645
EnsemblPlantsGene:Solyc09g090550.2EnsemblPlants:Solyc09g090550.2.1UniParc:UPI000276AD87:::
Description
Arp2/3 complex 34 kDa subunit [Source:UniProtKB/TrEMBL;Acc:K4CW81]
Coordinates
chr9:+:70040852..70045650
Molecular Weight (calculated)
43626.4 Da
IEP (calculated)
10.409
GRAVY (calculated)
-0.380
Length
374 amino acids
Sequence
(BLAST)
001: MARFERASPA LKEILLRLYR DERAIDADHH LHEFGSIEYY IQSLVSDPDH TYLSIATPIL SQAFLVSTRL SRYTIQKVKA ISAEVVEIVE PPKEGYQLTI
101: RLNFGRMPHG KEAIKMITDI AAVQGVILSS QLEEMLMNVN SQDVAQGMYK PIKLVYHPRE PFYVIKQPQK ITAVFPMRFK EKTDVIIATT FFQELMDVAN
201: TKACAKAPHC IWSPIPPPEL RGEAIEDLST NGGFVSFDIT SRHIEGKRLD KTVWNLLNFY AFVKNHVKTT RGFIQRRMRT CLQSLVEVLQ KTEPQDEQQS
301: KEVKGYKHMK KLVKFTKFKI IRYRSDFTSK LKRIRSRLKI HGFNRFRRKW LTFPIFSSKT KYRKLEKDIS LQHN
Best Arabidopsis Sequence Match ( AT2G33385.2 )
(BLAST)
001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD
Arabidopsis Description
ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.