Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17169 | Canola | cytosol | 87.17 | 86.24 |
| Bra005500.1-P | Field mustard | cytosol, nucleus, peroxisome | 72.46 | 84.95 |
| CDY23743 | Canola | cytosol | 28.61 | 68.15 |
| VIT_05s0049g01740.t01 | Wine grape | cytosol | 53.48 | 55.25 |
| Solyc09g090550.2.1 | Tomato | cytosol | 51.34 | 51.34 |
| PGSC0003DMT400044286 | Potato | cytosol | 50.27 | 50.13 |
| CDY37726 | Canola | cytosol | 22.99 | 50.0 |
| KRH33620 | Soybean | cytosol | 47.06 | 45.01 |
| KRG90360 | Soybean | cytosol | 28.61 | 44.96 |
| GSMUA_Achr1P00910_001 | Banana | cytosol | 37.17 | 40.29 |
| TraesCS2B01G402000.2 | Wheat | cytosol, mitochondrion | 38.24 | 39.72 |
| TraesCS2D01G381700.2 | Wheat | cytosol, mitochondrion | 37.97 | 39.44 |
| TraesCS2A01G385000.1 | Wheat | cytosol, mitochondrion | 37.7 | 39.17 |
| Os04t0512300-01 | Rice | cytosol | 37.97 | 38.59 |
| EES12487 | Sorghum | nucleus | 39.04 | 37.44 |
| AT1G30825.1 | Thale cress | mitochondrion | 27.54 | 32.39 |
| Zm00001d003039_P001 | Maize | nucleus | 31.02 | 28.22 |
Protein Annotations
| MapMan:20.2.2.1.4 | Gene3D:3.30.1460.20 | EntrezGene:817902 | EMBL:AC002332 | ProteinID:AEC08828.1 | InterPro:ARPC2 |
| InterPro:ARPC2/4 | ArrayExpress:AT2G33385 | EnsemblPlantsGene:AT2G33385 | RefSeq:AT2G33385 | TAIR:AT2G33385 | RefSeq:AT2G33385-TAIR-G |
| EnsemblPlants:AT2G33385.2 | TAIR:AT2G33385.2 | ncoils:Coil | UniProt:F4IVU1 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005885 | GO:GO:0007015 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030041 | GO:GO:0030833 | GO:GO:0034314 |
| GO:GO:0042995 | GO:GO:0051015 | InterPro:IPR034666 | RefSeq:NP_001189666.1 | PFAM:PF04045 | PO:PO:0000293 |
| PANTHER:PTHR12058 | PANTHER:PTHR12058:SF1 | SUPFAM:SSF69645 | UniParc:UPI0001E92CDE | Symbol:arpc2b | : |
Description
ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
Coordinates
chr2:-:14147382..14149902
Molecular Weight (calculated)
43173.5 Da
IEP (calculated)
10.042
GRAVY (calculated)
-0.398
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.