CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33620	Soybean	cytosol	83.19	50.64
VIT_05s0049g01740.t01	Wine grape	cytosol	61.76	40.61
PGSC0003DMT400044286	Potato	cytosol	55.88	35.47
Solyc09g090550.2.1	Tomato	cytosol	55.46	35.29
AT2G33385.2	Thale cress	cytosol	44.96	28.61
Bra005500.1-P	Field mustard	cytosol, nucleus, peroxisome	37.4	27.9
CDY17169	Canola	cytosol	44.12	27.78
GSMUA_Achr1P00910_001	Banana	cytosol	39.92	27.54
TraesCS2D01G381700.2	Wheat	cytosol, mitochondrion	40.34	26.67
TraesCS2A01G385000.1	Wheat	cytosol, mitochondrion	40.34	26.67
TraesCS2B01G402000.2	Wheat	cytosol, mitochondrion	39.92	26.39
CDY23743	Canola	cytosol	16.81	25.48
Os04t0512300-01	Rice	cytosol	39.08	25.27
KRH45310	Soybean	mitochondrion	22.69	24.11
EES12487	Sorghum	nucleus	38.24	23.33
KRH07553	Soybean	cytosol	26.05	22.55
Zm00001d003039_P001	Maize	nucleus	31.51	18.25
CDY37726	Canola	cytosol	11.34	15.7

Protein Annotations

MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	UniProt:A0A0R0EJW6	EMBL:ACUP02012601	InterPro:ARPC2	InterPro:ARPC2/4
EnsemblPlantsGene:GLYMA_20G086100	GO:GO:0003674	GO:GO:0003779	GO:GO:0005198	GO:GO:0005200	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005885	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030041
GO:GO:0030833	GO:GO:0034314	GO:GO:0051015	InterPro:IPR034666	EnsemblPlants:KRG90360	ProteinID:KRG90360
ProteinID:KRG90360.1	PFAM:PF04045	PANTHER:PTHR12058	PANTHER:PTHR12058:SF1	SUPFAM:SSF69645	UniParc:UPI0006EDB80E

Description

hypothetical protein

Coordinates

chr20:-:32012030..32015789

Molecular Weight (calculated)

27192.9 Da

IEP (calculated)

5.959

GRAVY (calculated)

-0.163

Length

238 amino acids

Sequence
(BLAST)

001: MEVKVKDNGN VCQRHDSAEK PLEIDHPLYE FGSVEYHIQS QASNPQVAYL SISMSPLCHG VLPNELSYYT IEMVKGLCPN VVEIAEPAKE GYQLALKLNL
101: NQIPRNKDYD KVIMEISTIH SVILSSQLKE ILWNVNSDDA LQGMYKPIKL LYHPKDLFVL IRQPQRIIAV FPIRFKEKSD VIIATNFFQV AIPPPELRGE
201: AFEDLSTNGG FFIFDISSRR VEGNRLDKIV WNVESIKF

Best Arabidopsis Sequence Match ( AT2G33385.1 )
(BLAST)

001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQDMGKAP
201: QCSWSPIPPL QLRGEPVQDL TTNSGFVSFD ITSRHIEGKR LDKTVWNLLN FYACAKYHIK CSRGYIQRRM RKRMETLVKL LNNTSLEEEA AQNENGRCKY
301: VKEFVKVPKG KLMMKQRCKE MTRRVKISKF RIKINGCARF RFNQRWISLP KFSSKPSDKS YTKLD

Arabidopsis Description

ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.