CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90360	Soybean	cytosol	50.64	83.19
VIT_05s0049g01740.t01	Wine grape	cytosol	61.38	66.3
PGSC0003DMT400044286	Potato	cytosol	54.99	57.33
Solyc09g090550.2.1	Tomato	cytosol	53.71	56.15
AT2G33385.2	Thale cress	cytosol	45.01	47.06
CDY23743	Canola	cytosol	18.67	46.5
CDY17169	Canola	cytosol	44.25	45.77
GSMUA_Achr1P00910_001	Banana	cytosol	37.6	42.61
Bra005500.1-P	Field mustard	cytosol, nucleus, peroxisome	34.53	42.32
TraesCS2A01G385000.1	Wheat	cytosol, mitochondrion	37.34	40.56
TraesCS2B01G402000.2	Wheat	cytosol, mitochondrion	37.08	40.28
TraesCS2D01G381700.2	Wheat	cytosol, mitochondrion	37.08	40.28
Os04t0512300-01	Rice	cytosol	37.6	39.95
CDY37726	Canola	cytosol	16.37	37.21
EES12487	Sorghum	nucleus	36.83	36.92
KRH07553	Soybean	cytosol	24.04	34.18
KRH45310	Soybean	mitochondrion	16.88	29.46
Zm00001d003039_P001	Maize	nucleus	29.41	27.98

Protein Annotations

EntrezGene:100817997	MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	EMBL:ACUP02006545	InterPro:ARPC2	InterPro:ARPC2/4
EnsemblPlantsGene:GLYMA_10G136400	GO:GO:0003674	GO:GO:0003779	GO:GO:0005198	GO:GO:0005200	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005885	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030041
GO:GO:0030833	GO:GO:0034314	GO:GO:0051015	InterPro:IPR034666	UniProt:K7LJ90	EnsemblPlants:KRH33620
ProteinID:KRH33620	ProteinID:KRH33620.1	PFAM:PF04045	PANTHER:PTHR12058	PANTHER:PTHR12058:SF1	SUPFAM:SSF69645
UniParc:UPI00029637E2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:36857587..36862820

Molecular Weight (calculated)

45631.3 Da

IEP (calculated)

9.958

GRAVY (calculated)

-0.364

Length

391 amino acids

Sequence
(BLAST)

001: MFTLTIQNIH TISEEEERSS YIRMACIERA SPALKQILLK LCCAEKPLEI DHHLYEFGSV EYHIQSQASN PQVAYLSISM PPLCHGVIQN ELSSYTIEMV
101: KGLCPNVVGI AEPAKEGYQL TLKLNLNQIP QNKDYDKVIK EISTVHSVIL SSQLKEILWN VNFDDALQGM YKPIKLVYHP KDHFFLIRQP QRIIAVFPIR
201: FREKSDVIIA TAFFQELVDV GSSDKWAKVP PCNWSAIPPP ELRGEAFEDL STNGGFFTFD ISSRHVEGNR LDKTVWNLLN FNAYVRYHVK STKGFIQRRM
301: RKRLESLVEV LHQTNLEENE QTKQHQVYRY TKKLVRSAKY AVLKQRWGTF GRKIKRIRFR LKIHGFTRFR QQWFRFPKFS TGYTKIVEKS A

Best Arabidopsis Sequence Match ( AT2G33385.2 )
(BLAST)

001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD

Arabidopsis Description

ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.