CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005500.1-P	Field mustard	cytosol, nucleus, peroxisome	83.07	98.43
AT2G33385.2	Thale cress	cytosol	86.24	87.17
CDY23743	Canola	cytosol	30.42	73.25
VIT_05s0049g01740.t01	Wine grape	cytosol	52.38	54.7
CDY37726	Canola	cytosol	23.55	51.74
Solyc09g090550.2.1	Tomato	cytosol	48.68	49.2
PGSC0003DMT400044286	Potato	cytosol	47.62	48.0
KRH33620	Soybean	cytosol	45.77	44.25
KRG90360	Soybean	cytosol	27.78	44.12
TraesCS2B01G402000.2	Wheat	cytosol, mitochondrion	37.3	39.17
TraesCS2D01G381700.2	Wheat	cytosol, mitochondrion	37.04	38.89
GSMUA_Achr1P00910_001	Banana	cytosol	35.45	38.84
TraesCS2A01G385000.1	Wheat	cytosol, mitochondrion	36.77	38.61
Os04t0512300-01	Rice	cytosol	37.57	38.59
EES12487	Sorghum	nucleus	37.57	36.41
CDY58050	Canola	mitochondrion	28.84	33.96
CDY02334	Canola	mitochondrion	28.84	33.96
CDX98226	Canola	cytosol, mitochondrion	28.31	33.65
CDX77566	Canola	mitochondrion	25.66	33.33
Zm00001d003039_P001	Maize	nucleus	30.69	28.22

Protein Annotations

MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	GO:A0A078FVN1	UniProt:A0A078FVN1	InterPro:ARPC2	InterPro:ARPC2/4
EnsemblPlants:CDY17169	ProteinID:CDY17169	ProteinID:CDY17169.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005856
GO:GO:0005885	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030041
GO:GO:0030833	GO:GO:0034314	EnsemblPlantsGene:GSBRNA2T00095231001	InterPro:IPR034666	PFAM:PF04045	PANTHER:PTHR12058
PANTHER:PTHR12058:SF1	SUPFAM:SSF69645	UniParc:UPI0004EDE60D	:	:	:

Description

BnaA05g10190DArp2/3 complex 34 kDa subunit [Source:UniProtKB/TrEMBL;Acc:A0A078FVN1]

Coordinates

chrLK032071:-:287474..290159

Molecular Weight (calculated)

43849.5 Da

IEP (calculated)

10.341

GRAVY (calculated)

-0.384

Length

378 amino acids

Sequence
(BLAST)

001: MAYLERSSPT LKETLLKIYR AEKPIEIDQH FYEFGSIQYH IKCSVLDTNI VYVSTSTLLE TQGIVTSKEI LSATYEVIKN IAVGVIDIVD PPRLGFQLTL
101: KLHLDNIPRG KAAEAIKIIT RISEIQAIIL SSQLKKMLKR LNFQDDSQAI NNNNRPIRIV YHPSEPFYVF RQAEKITAVF PMNFKDNSDV VIAMSFFQEL
201: VEVGSQKEMG KAPQCSWSPV PPFQLRGEPV HDLTTNAGFV SFDITSRHVE GKRLDKTVWN LLNFYAYVKY HIKCSRGYIQ RRMRKRMDSL VKRLNNTRFE
301: EEAPQKENGA CKYVKELVKV PKGKLMMQQR CKDMTRRVKI SKFRIRINGC ARFRFNQRWI SIPKFSSKSS NKSYTKLD

Best Arabidopsis Sequence Match ( AT2G33385.2 )
(BLAST)

001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD

Arabidopsis Description

ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.