Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37726 | Canola | cytosol | 50.96 | 46.51 |
| CDY17169 | Canola | cytosol | 73.25 | 30.42 |
| AT2G33385.2 | Thale cress | cytosol | 68.15 | 28.61 |
| VIT_05s0049g01740.t01 | Wine grape | cytosol | 49.68 | 21.55 |
| Solyc09g090550.2.1 | Tomato | cytosol | 49.68 | 20.86 |
| PGSC0003DMT400044286 | Potato | cytosol | 48.41 | 20.27 |
| TraesCS2B01G402000.2 | Wheat | cytosol, mitochondrion | 45.86 | 20.0 |
| TraesCS2A01G385000.1 | Wheat | cytosol, mitochondrion | 45.22 | 19.72 |
| GSMUA_Achr1P00910_001 | Banana | cytosol | 42.68 | 19.42 |
| TraesCS2D01G381700.2 | Wheat | cytosol, mitochondrion | 43.95 | 19.17 |
| Os04t0512300-01 | Rice | cytosol | 43.95 | 18.75 |
| KRH33620 | Soybean | cytosol | 46.5 | 18.67 |
| CDX98226 | Canola | cytosol, mitochondrion | 36.31 | 17.92 |
| CDY58050 | Canola | mitochondrion | 36.31 | 17.76 |
| CDY02334 | Canola | mitochondrion | 36.31 | 17.76 |
| CDX77566 | Canola | mitochondrion | 32.48 | 17.53 |
| KRG90360 | Soybean | cytosol | 25.48 | 16.81 |
| EES12487 | Sorghum | nucleus | 41.4 | 16.67 |
| Zm00001d003039_P001 | Maize | nucleus | 26.75 | 10.22 |
Protein Annotations
| MapMan:20.2.2.1.4 | Gene3D:3.30.1460.20 | GO:A0A078GGJ1 | UniProt:A0A078GGJ1 | InterPro:ARPC2 | InterPro:ARPC2/4 |
| EnsemblPlants:CDY23743 | ProteinID:CDY23743 | ProteinID:CDY23743.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 |
| GO:GO:0005885 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030041 |
| GO:GO:0030833 | GO:GO:0034314 | EnsemblPlantsGene:GSBRNA2T00024077001 | InterPro:IPR034666 | PFAM:PF04045 | PANTHER:PTHR12058 |
| PANTHER:PTHR12058:SF1 | SUPFAM:SSF69645 | UniParc:UPI0004EDD637 | : | : | : |
Description
BnaC04g43790DArp2/3 complex 34 kDa subunit [Source:UniProtKB/TrEMBL;Acc:A0A078GGJ1]
Coordinates
chrLK032148:+:167606..168778
Molecular Weight (calculated)
18287.0 Da
IEP (calculated)
9.037
GRAVY (calculated)
-0.343
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYHSTAEAI KIITRISEIQ ADRTAVFPMN FRDDSDVVPK FKKELVEVGS QNEMGKAPQC SWSPVPPFQL RREPVQDLTT NSGFISFDIT SRHVEGKRVL
101: DTTVWNLLNF YAYVEYHIKC SRGYIQRRMR KGMDSLAKVF YSFYVHTDEI TTSLMIK
101: DTTVWNLLNF YAYVEYHIKC SRGYIQRRMR KGMDSLAKVF YSFYVHTDEI TTSLMIK
001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKVF LSYITYTHES
301: TTIVDIS
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKVF LSYITYTHES
301: TTIVDIS
Arabidopsis Description
ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.