Factsheet for GSMUA_Achr1P00910_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g01740.t01	Wine grape	cytosol	48.41	46.13
TraesCS2A01G385000.1	Wheat	cytosol, mitochondrion	45.51	43.61
TraesCS2B01G402000.2	Wheat	cytosol, mitochondrion	44.93	43.06
PGSC0003DMT400044286	Potato	cytosol	46.67	42.93
CDY23743	Canola	cytosol	19.42	42.68
Os04t0512300-01	Rice	cytosol	45.51	42.66
TraesCS2D01G381700.2	Wheat	cytosol, mitochondrion	44.35	42.5
Solyc09g090550.2.1	Tomato	cytosol	45.51	41.98
KRG90360	Soybean	cytosol	27.54	39.92
EES12487	Sorghum	nucleus	43.77	38.72
KRH33620	Soybean	cytosol	42.61	37.6
GSMUA_Achr5P09480_001	Banana	mitochondrion	35.36	37.54
AT2G33385.2	Thale cress	cytosol	40.29	37.17
CDY17169	Canola	cytosol	38.84	35.45
Bra005500.1-P	Field mustard	cytosol, nucleus, peroxisome	31.01	33.54
Zm00001d003039_P001	Maize	nucleus	37.97	31.87
CDY37726	Canola	cytosol	14.49	29.07

Protein Annotations

MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	InterPro:ARPC2	InterPro:ARPC2/4	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005885	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043
GO:GO:0030041	GO:GO:0030833	GO:GO:0034314	EnsemblPlantsGene:GSMUA_Achr1G00910_001	EnsemblPlants:GSMUA_Achr1P00910_001	EnsemblPlants:GSMUA_Achr1T00910_001
InterPro:IPR034666	UniProt:M0RVZ9	PFAM:PF04045	PANTHER:PTHR12058	PANTHER:PTHR12058:SF1	SUPFAM:SSF69645
UniParc:UPI0002964C9F	:	:	:	:	:

Description

Putative Actin-related protein 2/3 complex subunit 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G00910_001]

Coordinates

chr1:+:678423..681763

Molecular Weight (calculated)

40658.7 Da

IEP (calculated)

10.123

GRAVY (calculated)

-0.345

Length

345 amino acids

Sequence
(BLAST)

001: MAFFNRVSPA LVEILNKLQS GESLTDFDHN LYEYGSVRYN IQASASSPQI VNLSTWMPPL SPEFSSDCLP DCALQDVKRV YLDSAEVVEP SKQGYMLTLR
101: IDFAELPQRK EDRMKAISEI SSLHAVILSS QMKDMLWNLE PRYMGNGMCN PIKIVHQLKE PFFVIKMLEK TTVIYPMRFK DDTDVILATS FFQELVDVSN
201: LEAHYKAPRC TWSPIPPLEL RGEPFQYLTT NGGFVSLEIF SQHIRGTKAD NTVWNLLTFV SYVKYHVKCT RGFIQRKMRQ RQESLTEKLM NFSRSKMFKK
301: RYTIITNKIK KFHYRIKIKW LLHRFRRQWL RVQKIPLLRK YRKLD

Best Arabidopsis Sequence Match ( AT2G33385.2 )
(BLAST)

001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD

Arabidopsis Description

ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.