Factsheet for TraesCS2B01G402000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G385000.1	Wheat	cytosol, mitochondrion	94.44	94.44
TraesCS2D01G381700.2	Wheat	cytosol, mitochondrion	92.78	92.78
Os04t0512300-01	Rice	cytosol	70.83	69.29
EES12487	Sorghum	nucleus	72.78	67.18
Zm00001d003039_P001	Maize	nucleus	63.61	55.72
VIT_05s0049g01740.t01	Wine grape	cytosol	46.39	46.13
CDY23743	Canola	cytosol	20.0	45.86
GSMUA_Achr1P00910_001	Banana	cytosol	43.06	44.93
PGSC0003DMT400044286	Potato	cytosol	42.22	40.53
Solyc09g090550.2.1	Tomato	cytosol	41.67	40.11
KRG90360	Soybean	cytosol	26.39	39.92
AT2G33385.2	Thale cress	cytosol	39.72	38.24
CDY17169	Canola	cytosol	39.17	37.3
KRH33620	Soybean	cytosol	40.28	37.08
Bra005500.1-P	Field mustard	cytosol, nucleus, peroxisome	31.94	36.05
CDY37726	Canola	cytosol	16.94	35.47
TraesCS3B01G262900.2	Wheat	cytosol	29.44	32.82

Protein Annotations

MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	InterPro:ARPC2	InterPro:ARPC2/4	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005885	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030041	GO:GO:0030833	GO:GO:0034314	InterPro:IPR034666	PFAM:PF04045
PANTHER:PTHR12058	PANTHER:PTHR12058:SF1	SUPFAM:SSF69645	EnsemblPlantsGene:TraesCS2B01G402000	EnsemblPlants:TraesCS2B01G402000.2	SEG:seg

Description

No Description!

Coordinates

chr2B:+:570882791..570884991

Molecular Weight (calculated)

41113.0 Da

IEP (calculated)

11.213

GRAVY (calculated)

-0.420

Length

360 amino acids

Sequence
(BLAST)

001: MAFFNGGSRA LVEILTRFQS SERPMPVDHT FFELGSVRYH VQASASDPEN VYLSISTPSL SHEASTSTCL PEFTLQEVRK MYHKFAEIVE PAREGYALTL
101: KLNFSGLTRP KDRARAVRQV SLLQSIVLGS QLKHLLGSLG SSGATKLVYN HRDPFFVSRT PGKINAIFPM RFRDDTDVAV ATSFFQELQD AGSSYAKAPK
201: CSWSAIPPPE LRGESVQHLT TNGGFVSFDI FERHVKRKRA AKTAWILLNF QAYVKYHIKC TRNYIQSRMR KRQESLAEVI QNARLRGGQD KKKLQVRKKS
301: KRRLFSLGKA KKLQKGFRSV IDGLRRLRLR IRVKALDRFR RCFVMPKLAT KKHDYLRLGA

Best Arabidopsis Sequence Match ( AT2G33385.2 )
(BLAST)

001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD

Arabidopsis Description

ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.