Factsheet for Os04t0512300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G385000.1	Wheat	cytosol, mitochondrion	71.47	73.06
TraesCS2D01G381700.2	Wheat	cytosol, mitochondrion	70.65	72.22
TraesCS2B01G402000.2	Wheat	cytosol, mitochondrion	69.29	70.83
EES12487	Sorghum	nucleus	70.65	66.67
Zm00001d003039_P001	Maize	nucleus	61.41	54.99
VIT_05s0049g01740.t01	Wine grape	cytosol	45.38	46.13
GSMUA_Achr1P00910_001	Banana	cytosol	42.66	45.51
CDY23743	Canola	cytosol	18.75	43.95
PGSC0003DMT400044286	Potato	cytosol	42.12	41.33
Solyc09g090550.2.1	Tomato	cytosol	41.85	41.18
KRG90360	Soybean	cytosol	25.27	39.08
AT2G33385.2	Thale cress	cytosol	38.59	37.97
KRH33620	Soybean	cytosol	39.95	37.6
CDY17169	Canola	cytosol	38.59	37.57
Bra005500.1-P	Field mustard	cytosol, nucleus, peroxisome	31.79	36.68
Os01t0654300-01	Rice	cytosol	5.98	34.38
CDY37726	Canola	cytosol	15.49	33.14

Protein Annotations

MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	EMBL:AK071791	InterPro:ARPC2	InterPro:ARPC2/4	ProteinID:BAF15211.1
ProteinID:BAS90047.1	ProteinID:CAE03391.2	ProteinID:EEE61328.1	GO:GO:0003674	GO:GO:0003779	GO:GO:0005198
GO:GO:0005200	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005856	GO:GO:0005885	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030041	GO:GO:0030833	GO:GO:0034314	GO:GO:0051015	InterPro:IPR034666
EnsemblPlantsGene:Os04g0512300	EnsemblPlants:Os04t0512300-01	PFAM:PF04045	PANTHER:PTHR12058	PANTHER:PTHR12058:SF1	UniProt:Q7XPZ3
SUPFAM:SSF69645	UniParc:UPI00001B16AA	SEG:seg	:	:	:

Description

Arp2/3 complex, 34kDa subunit p34-Arc family protein. (Os04t0512300-01)

Coordinates

chr4:-:25608241..25611089

Molecular Weight (calculated)

42374.6 Da

IEP (calculated)

10.898

GRAVY (calculated)

-0.407

Length

368 amino acids

Sequence
(BLAST)

001: MAFFSSGSRA LVEILTGLQS VERPMPVDHT LFEFGSIRYH LQASITDSEN IYLSISTPSL SYEASPSSGL PEITLQETRK MYHKFAEIIE PAKEGYTLTL
101: RLNFSGLTRP KDRTKAINQI SLLQSVILSS QLKDMLASLG SSGTMKLVYN QRDPFFVSKT PVKISAIFPM RFRDDTDLAI ASSFFQELQD LGSTSSFSRA
201: PRCSWSPIPP PELRGEYVHH LTTNGGFVSF DILARHVKGR RAARTAWILL NFQSYVKYHI KCTRSYIQSR MRKRLEIMTE VIDDAKFRGN DESSKKLQVR
301: KRSKRRSIKF ARAKKLQKGF KAVIDKIKRL RLRIRVKGLD RFRRHCQCFP VLKLTMAQRK EQKYQKLE

Best Arabidopsis Sequence Match ( AT2G33385.2 )
(BLAST)

001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQELVEVG
201: SQKDMGKAPQ CSWSPIPPLQ LRGEPVQDLT TNSGFVSFDI TSRHIEGKRL DKTVWNLLNF YACAKYHIKC SRGYIQRRMR KRMETLVKLL NNTSLEEEAA
301: QNENGRCKYV KEFVKVPKGK LMMKQRCKEM TRRVKISKFR IKINGCARFR FNQRWISLPK FSSKPSDKSY TKLD

Arabidopsis Description

ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.