Factsheet for Zm00001d003039_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12487	Sorghum	nucleus	68.61	72.31
TraesCS2A01G385000.1	Wheat	cytosol, mitochondrion	56.93	65.0
TraesCS2B01G402000.2	Wheat	cytosol, mitochondrion	55.72	63.61
TraesCS2D01G381700.2	Wheat	cytosol, mitochondrion	54.74	62.5
Os04t0512300-01	Rice	cytosol	54.99	61.41
GSMUA_Achr1P00910_001	Banana	cytosol	31.87	37.97
VIT_05s0049g01740.t01	Wine grape	cytosol	32.36	36.74
Solyc09g090550.2.1	Tomato	cytosol	30.66	33.69
PGSC0003DMT400044286	Potato	cytosol	30.41	33.33
KRG90360	Soybean	cytosol	18.25	31.51
AT2G33385.2	Thale cress	cytosol	28.22	31.02
CDY17169	Canola	cytosol	28.22	30.69
KRH33620	Soybean	cytosol	27.98	29.41
Bra005500.1-P	Field mustard	cytosol, nucleus, peroxisome	22.14	28.53
Zm00001d007806_P003	Maize	mitochondrion, peroxisome	22.87	27.01
CDY23743	Canola	cytosol	10.22	26.75
CDY37726	Canola	cytosol	8.27	19.77

Protein Annotations

MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	UniProt:A0A1D6E645	InterPro:ARPC2	InterPro:ARPC2/4	ncoils:Coil
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005885	GO:GO:0008150
GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030041	GO:GO:0030833	GO:GO:0034314
InterPro:IPR034666	ProteinID:ONM15937.1	PFAM:PF04045	PANTHER:PTHR12058	PANTHER:PTHR12058:SF1	SUPFAM:SSF69645
UniParc:UPI0008444CE2	EnsemblPlantsGene:Zm00001d003039	EnsemblPlants:Zm00001d003039_P001	EnsemblPlants:Zm00001d003039_T001	SEG:seg	:

Description

Actin-related protein 2/3 complex subunit 2B

Coordinates

chr2:-:30079480..30081862

Molecular Weight (calculated)

46607.3 Da

IEP (calculated)

11.343

GRAVY (calculated)

-0.482

Length

411 amino acids

Sequence
(BLAST)

001: MAFFSSGSRV LVEILTRMQS AERPMPVDHT FFESGSIRYH VEASASDPEN VFLSISTPSL SYDYEEAAAA PSSSRLPELT LQEARKTYHR FAEMVEPPRE
101: GYVLTLKLNF SGLTRPKDRV KAINQVSLLQ SVVLSSQLKH MLGSLGSSGT MRLVYNNQRE PFFVSKTAEK INAIFPMRFR DDTDLAIATS FFQVCLHAFA
201: SHPRIRHAAA DEPFVVVAGA AGGRELVREG AQVQLVADPT AGAARGERAP PHHQRRIRLL RRPVAAREGE AAAKTAWILL NFQSYVKYHI KCTRSHVQSR
301: MRERLEALTE AVQNARLRGN SGDDDKKRSS QVVKKRSKRR LASLAKASDR VRKGFRAVLD KMKRLRLRVR VKGLDRLRRQ FRCRCFAVPR LPAPSRTGRR
401: KEHYRYHKLA E

Best Arabidopsis Sequence Match ( AT2G33385.1 )
(BLAST)

001: MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL
101: GLNLDNIPRG KEAIKIITRI SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF KDNSDVVIAT SFFQDMGKAP
201: QCSWSPIPPL QLRGEPVQDL TTNSGFVSFD ITSRHIEGKR LDKTVWNLLN FYACAKYHIK CSRGYIQRRM RKRMETLVKL LNNTSLEEEA AQNENGRCKY
301: VKEFVKVPKG KLMMKQRCKE MTRRVKISKF RIKINGCARF RFNQRWISLP KFSSKPSDKS YTKLD

Arabidopsis Description

ARPC2BActin-related protein 2/3 complex subunit 2B [Source:UniProtKB/Swiss-Prot;Acc:F4IVU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.