Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023140.1-P | Field mustard | mitochondrion | 94.34 | 93.75 |
| CDY02334 | Canola | mitochondrion | 94.34 | 93.46 |
| CDY58050 | Canola | mitochondrion | 94.34 | 93.46 |
| Bra014893.1-P | Field mustard | mitochondrion | 92.77 | 92.77 |
| CDX98226 | Canola | cytosol, mitochondrion | 91.51 | 91.51 |
| CDX77566 | Canola | mitochondrion | 79.87 | 87.29 |
| VIT_01s0011g05400.t01 | Wine grape | mitochondrion | 72.33 | 70.12 |
| PGSC0003DMT400067754 | Potato | mitochondrion | 70.44 | 68.29 |
| KRH07553 | Soybean | cytosol | 58.8 | 68.0 |
| Solyc11g068610.1.1 | Tomato | cytosol, mitochondrion | 70.13 | 67.99 |
| GSMUA_Achr5P09480_001 | Banana | mitochondrion | 67.3 | 65.85 |
| Os01t0654300-01 | Rice | cytosol | 13.21 | 65.62 |
| KXG38865 | Sorghum | peroxisome | 66.04 | 65.02 |
| OQU88580 | Sorghum | plasma membrane | 46.86 | 64.5 |
| TraesCS3A01G236900.1 | Wheat | cytosol, mitochondrion | 65.09 | 64.09 |
| TraesCS3B01G262900.2 | Wheat | cytosol | 64.78 | 63.78 |
| TraesCS3D01G237300.1 | Wheat | cytosol | 64.15 | 63.16 |
| Zm00001d007806_P003 | Maize | mitochondrion, peroxisome | 65.72 | 60.06 |
| HORVU3Hr1G059010.8 | Barley | mitochondrion | 64.47 | 58.57 |
| KRH45310 | Soybean | mitochondrion | 39.31 | 55.8 |
| AT2G33385.2 | Thale cress | cytosol | 32.39 | 27.54 |
Protein Annotations
| MapMan:20.2.2.1.4 | Gene3D:3.30.1460.20 | EntrezGene:839965 | UniProt:A0A178WAY2 | ProteinID:AAD32938.1 | ProteinID:AEE31281.1 |
| EMBL:AK118475 | InterPro:ARPC2 | InterPro:ARPC2/4 | Symbol:ARPC2A | ArrayExpress:AT1G30825 | EnsemblPlantsGene:AT1G30825 |
| RefSeq:AT1G30825 | TAIR:AT1G30825 | RefSeq:AT1G30825-TAIR-G | EnsemblPlants:AT1G30825.1 | TAIR:AT1G30825.1 | EMBL:AY084256 |
| EMBL:BT005308 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 |
| GO:GO:0005885 | GO:GO:0007015 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010090 |
| GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030041 | GO:GO:0030154 | GO:GO:0030833 | GO:GO:0034314 |
| GO:GO:0042995 | GO:GO:0051015 | InterPro:IPR034666 | RefSeq:NP_564364.1 | ProteinID:OAP15599.1 | PFAM:PF04045 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR12058 |
| UniProt:Q8LGI3 | SUPFAM:SSF69645 | UniParc:UPI000000C5DF | SEG:seg | : | : |
Description
ARPC2AActin-related protein 2/3 complex subunit 2A [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI3]
Coordinates
chr1:+:10960908..10963231
Molecular Weight (calculated)
36042.8 Da
IEP (calculated)
10.007
GRAVY (calculated)
-0.181
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MILLQSHSRF LLQTLLTRAQ NLDKAVELDY QWIEFDDVRY HVQVTMKNPN LLLLSVSLPN PPPEAMSFDG LPLGAIEAIK TTYGTGFQIL DPPRDGFSLT
101: LKLNFSKVRP DEELLTKLAS IREVVMGAPL KIIFKHLASR TVAPELDRLV AIMHRPNETF FLVPQADKVT VAFPMRFKDS VDTILATSFL KEFVEARRAA
201: ALNTAPSCSW SPTAPQELEG APKETLSANA GFVTFVIFPR HVEGKKLDRT VWNLSTFHAY VSYHVKFSEG FMHTRMRRRV ESMIQALDQA KPLEKTRSMN
301: NKSFKRLGLN EVNHTNSK
101: LKLNFSKVRP DEELLTKLAS IREVVMGAPL KIIFKHLASR TVAPELDRLV AIMHRPNETF FLVPQADKVT VAFPMRFKDS VDTILATSFL KEFVEARRAA
201: ALNTAPSCSW SPTAPQELEG APKETLSANA GFVTFVIFPR HVEGKKLDRT VWNLSTFHAY VSYHVKFSEG FMHTRMRRRV ESMIQALDQA KPLEKTRSMN
301: NKSFKRLGLN EVNHTNSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.