Factsheet for PGSC0003DMT400067754

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g068610.1.1	Tomato	cytosol, mitochondrion	99.09	99.09
VIT_01s0011g05400.t01	Wine grape	mitochondrion	77.74	77.74
KRH07553	Soybean	cytosol	63.72	76.0
GSMUA_Achr5P09480_001	Banana	mitochondrion	70.73	71.38
AT1G30825.1	Thale cress	mitochondrion	68.29	70.44
Os01t0654300-01	Rice	cytosol	13.72	70.31
Bra014893.1-P	Field mustard	mitochondrion	67.38	69.5
KXG38865	Sorghum	peroxisome	68.29	69.35
Bra023140.1-P	Field mustard	mitochondrion	67.38	69.06
TraesCS3D01G237300.1	Wheat	cytosol	67.99	69.04
TraesCS3B01G262900.2	Wheat	cytosol	67.99	69.04
CDY02334	Canola	mitochondrion	67.38	68.85
TraesCS3A01G236900.1	Wheat	cytosol, mitochondrion	67.68	68.73
CDX98226	Canola	cytosol, mitochondrion	66.46	68.55
CDY58050	Canola	mitochondrion	67.07	68.54
OQU88580	Sorghum	plasma membrane	48.17	68.4
CDX77566	Canola	mitochondrion	59.45	67.01
Zm00001d007806_P003	Maize	mitochondrion, peroxisome	68.29	64.37
HORVU3Hr1G059010.8	Barley	mitochondrion	67.99	63.71
KRH45310	Soybean	mitochondrion	41.16	60.27
PGSC0003DMT400044286	Potato	cytosol	33.23	29.07

Protein Annotations

EntrezGene:102599122	MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	InterPro:ARPC2	InterPro:ARPC2/4	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005856	GO:GO:0005885	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030041	GO:GO:0030833	GO:GO:0034314	InterPro:IPR034666	UniProt:M1CHU1
PFAM:PF04045	EnsemblPlantsGene:PGSC0003DMG400026351	PGSC:PGSC0003DMG400026351	EnsemblPlants:PGSC0003DMT400067754	PANTHER:PTHR12058	SUPFAM:SSF69645
UniParc:UPI0002955013	RefSeq:XP_006362875.1	SEG:seg	:	:	:

Description

ARP2/3 complex 34 kDa subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400026351]

Coordinates

chr11:+:40484563..40492546

Molecular Weight (calculated)

36840.7 Da

IEP (calculated)

9.726

GRAVY (calculated)

-0.170

Length

328 amino acids

Sequence
(BLAST)

001: MILLQSPSRY LLQILYNRVQ NLEKGVELDC QWVEFDDIRY HIQGSVKNPN VLLLSVSLPI PPPETVLFGG LPLGALEAIK AAYGVVAQIL DPPRDGFNLT
101: LKLNLSKLPP DEEQKHALLT KIASVREVVM GAPLRAVLKQ LVTRTVPSDL GKPVALVHRP NESFFLVPQA DKVTVIFPMR FNDSIDTVLA TSFLQEFVEA
201: RRTAGLNNAP PCLWSPSPPQ ELTEAFTEAL SANAGFVSFV IFSRHVEGRK LDRTVWNLST FHAYVNYHVK CSECFMHTRM RRQVESLIQA LDRAKPDPEK
301: AKKNSPNRSF KRMSLKDGNN SLGSRSWK

Best Arabidopsis Sequence Match ( AT1G30825.1 )
(BLAST)

001: MILLQSHSRF LLQTLLTRAQ NLDKAVELDY QWIEFDDVRY HVQVTMKNPN LLLLSVSLPN PPPEAMSFDG LPLGAIEAIK TTYGTGFQIL DPPRDGFSLT
101: LKLNFSKVRP DEELLTKLAS IREVVMGAPL KIIFKHLASR TVAPELDRLV AIMHRPNETF FLVPQADKVT VAFPMRFKDS VDTILATSFL KEFVEARRAA
201: ALNTAPSCSW SPTAPQELEG APKETLSANA GFVTFVIFPR HVEGKKLDRT VWNLSTFHAY VSYHVKFSEG FMHTRMRRRV ESMIQALDQA KPLEKTRSMN
301: NKSFKRLGLN EVNHTNSK

Arabidopsis Description

ARPC2AActin-related protein 2/3 complex subunit 2A [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.