Factsheet for HORVU3Hr1G059010.8

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G029210.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30825.1	HORVU3Hr1G029210.3	AT1G29170.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G236900.1	Wheat	cytosol, mitochondrion	89.71	97.21
TraesCS3D01G237300.1	Wheat	cytosol	89.14	96.59
TraesCS3B01G262900.2	Wheat	cytosol	88.86	96.28
KXG38865	Sorghum	peroxisome	83.43	90.4
Os01t0654300-01	Rice	cytosol	16.0	87.5
OQU88580	Sorghum	plasma membrane	56.29	85.28
Zm00001d007806_P003	Maize	mitochondrion, peroxisome	84.0	84.48
GSMUA_Achr5P09480_001	Banana	mitochondrion	71.71	77.23
KRH07553	Soybean	cytosol	55.71	70.91
VIT_01s0011g05400.t01	Wine grape	mitochondrion	64.57	68.9
PGSC0003DMT400067754	Potato	mitochondrion	63.71	67.99
Solyc11g068610.1.1	Tomato	cytosol, mitochondrion	63.43	67.68
AT1G30825.1	Thale cress	mitochondrion	58.57	64.47
Bra014893.1-P	Field mustard	mitochondrion	58.0	63.84
CDX98226	Canola	cytosol, mitochondrion	57.43	63.21
Bra023140.1-P	Field mustard	mitochondrion	57.71	63.12
CDY58050	Canola	mitochondrion	57.71	62.93
CDY02334	Canola	mitochondrion	57.71	62.93
CDX77566	Canola	mitochondrion	51.43	61.86
KRH45310	Soybean	mitochondrion	33.14	51.79

Protein Annotations

MapMan:20.2.2.1.4	Gene3D:3.30.1460.20	UniProt:A0A287L7X2	InterPro:ARPC2	InterPro:ARPC2/4	ncoils:Coil
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005856	GO:GO:0005885	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030041	GO:GO:0030833	GO:GO:0034314	EnsemblPlantsGene:HORVU3Hr1G059010
EnsemblPlants:HORVU3Hr1G059010.8	InterPro:IPR034666	PFAM:PF04045	SUPFAM:SSF69645	UniParc:UPI000B489476	SEG:seg

Description

Arp2/3 complex 34 kDa subunit [Source:UniProtKB/TrEMBL;Acc:A0A287L7X2]

Coordinates

chrchr3H:+:445928738..445933244

Molecular Weight (calculated)

39033.5 Da

IEP (calculated)

8.969

GRAVY (calculated)

-0.018

Length

350 amino acids

Sequence
(BLAST)

001: MILLQSPSRF ILQILKDRVS RYAAAQPIFL CGPNGISHVA HAEYSRCSGD KGVDIDCHTV EFDDVRYHIQ FSTRNPKVMV LSVALPLAPP EAILYDGLPL
101: GAIDAIKAAY GTVVQILDPP KDCFDLTMKI NLTKLPTDEE QRNVVLTQIA SVREVVLGAP LKLLLKHLAS KTVAPNVDKL VALVHRPNES FFLAPQADKV
201: TVVYPMRFQD SIDIVLATSF LQEFVEARRT AALNNAPSCM WSPVPPLELK GVNADALDAN AGFVTFVVFP RHVEGRKLDK TVWSLLTFHA YVSYHVKCSE
301: GFMHTRMRRR VESLIQALDR AKSDAEKLKK LVHGGSFRRL SMKHEGDSRH

Best Arabidopsis Sequence Match ( AT1G30825.1 )
(BLAST)

001: MILLQSHSRF LLQTLLTRAQ NLDKAVELDY QWIEFDDVRY HVQVTMKNPN LLLLSVSLPN PPPEAMSFDG LPLGAIEAIK TTYGTGFQIL DPPRDGFSLT
101: LKLNFSKVRP DEELLTKLAS IREVVMGAPL KIIFKHLASR TVAPELDRLV AIMHRPNETF FLVPQADKVT VAFPMRFKDS VDTILATSFL KEFVEARRAA
201: ALNTAPSCSW SPTAPQELEG APKETLSANA GFVTFVIFPR HVEGKKLDRT VWNLSTFHAY VSYHVKFSEG FMHTRMRRRV ESMIQALDQA KPLEKTRSMN
301: NKSFKRLGLN EVNHTNSK

Arabidopsis Description

ARPC2AActin-related protein 2/3 complex subunit 2A [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.