Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra010847.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G30825.1 | Bra010847.1-P | AT1G29170.1 | 17267444 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY02334 | Canola | mitochondrion | 99.69 | 99.38 |
CDY58050 | Canola | mitochondrion | 99.06 | 98.75 |
Bra014893.1-P | Field mustard | mitochondrion | 96.25 | 96.86 |
AT1G30825.1 | Thale cress | mitochondrion | 93.75 | 94.34 |
VIT_01s0011g05400.t01 | Wine grape | mitochondrion | 70.0 | 68.29 |
KRH07553 | Soybean | cytosol | 58.12 | 67.64 |
PGSC0003DMT400067754 | Potato | mitochondrion | 69.06 | 67.38 |
Os01t0654300-01 | Rice | cytosol | 13.44 | 67.19 |
Solyc11g068610.1.1 | Tomato | cytosol, mitochondrion | 68.75 | 67.07 |
OQU88580 | Sorghum | plasma membrane | 47.5 | 65.8 |
GSMUA_Achr5P09480_001 | Banana | mitochondrion | 65.31 | 64.31 |
KXG38865 | Sorghum | peroxisome | 64.38 | 63.78 |
TraesCS3A01G236900.1 | Wheat | cytosol, mitochondrion | 63.12 | 62.54 |
TraesCS3B01G262900.2 | Wheat | cytosol | 62.81 | 62.23 |
TraesCS3D01G237300.1 | Wheat | cytosol | 62.19 | 61.61 |
Zm00001d007806_P003 | Maize | mitochondrion, peroxisome | 64.06 | 58.91 |
HORVU3Hr1G059010.8 | Barley | mitochondrion | 63.12 | 57.71 |
KRH45310 | Soybean | mitochondrion | 37.81 | 54.02 |
Bra005500.1-P | Field mustard | cytosol, nucleus, peroxisome | 28.12 | 28.21 |
Protein Annotations
MapMan:20.2.2.1.4 | Gene3D:3.30.1460.20 | InterPro:ARPC2 | InterPro:ARPC2/4 | EnsemblPlantsGene:Bra023140 | EnsemblPlants:Bra023140.1 |
EnsemblPlants:Bra023140.1-P | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005885 | GO:GO:0008150 |
GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030041 | GO:GO:0030833 | GO:GO:0034314 |
InterPro:IPR034666 | UniProt:M4E2Y9 | PFAM:PF04045 | PANTHER:PTHR12058 | SUPFAM:SSF69645 | UniParc:UPI0002542476 |
SEG:seg | : | : | : | : | : |
Description
AT1G30825 (E=5e-148) ARPC2A, DIS2 | DIS2 (DISTORTED TRICHOMES 2); structural molecule
Coordinates
chrA09:-:21391660..21393612
Molecular Weight (calculated)
36056.6 Da
IEP (calculated)
9.918
GRAVY (calculated)
-0.194
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQSHSRFLL QTLLTRAQNL DKAVELDYQW IEFDDVRYHV QVTIKNPNIL LLSVSLPNPP PEAMSFDGLP LGAIEAIKTT YGTGFQILDP PRDGFSLTLK
101: LNFSKVRPDE AFRNSLLTKL ASIREVVMGA PLKIILKHLA SRTVAPELDR LVAIMHRPNE TFFLVPQADK VTVAFPMRFK DSVDTILATS FLKQFVEARR
201: AASLSSAPSC SWSPTAPQEL EGAPKETLSA NAGFVTFVIM PRHVEGEKLD RTVWNLSTFH AYVSYHVKCS EGFMHTRMRR RVESMIQALD QAKPLEKTRS
301: MNNKSFKRLG LNDANHTTSN
101: LNFSKVRPDE AFRNSLLTKL ASIREVVMGA PLKIILKHLA SRTVAPELDR LVAIMHRPNE TFFLVPQADK VTVAFPMRFK DSVDTILATS FLKQFVEARR
201: AASLSSAPSC SWSPTAPQEL EGAPKETLSA NAGFVTFVIM PRHVEGEKLD RTVWNLSTFH AYVSYHVKCS EGFMHTRMRR RVESMIQALD QAKPLEKTRS
301: MNNKSFKRLG LNDANHTTSN
001: MILLQSHSRF LLQTLLTRAQ NLDKAVELDY QWIEFDDVRY HVQVTMKNPN LLLLSVSLPN PPPEAMSFDG LPLGAIEAIK TTYGTGFQIL DPPRDGFSLT
101: LKLNFSKVRP DEELLTKLAS IREVVMGAPL KIIFKHLASR TVAPELDRLV AIMHRPNETF FLVPQADKVT VAFPMRFKDS VDTILATSFL KEFVEARRAA
201: ALNTAPSCSW SPTAPQELEG APKETLSANA GFVTFVIFPR HVEGKKLDRT VWNLSTFHAY VSYHVKFSEG FMHTRMRRRV ESMIQALDQA KPLEKTRSMN
301: NKSFKRLGLN EVNHTNSK
101: LKLNFSKVRP DEELLTKLAS IREVVMGAPL KIIFKHLASR TVAPELDRLV AIMHRPNETF FLVPQADKVT VAFPMRFKDS VDTILATSFL KEFVEARRAA
201: ALNTAPSCSW SPTAPQELEG APKETLSANA GFVTFVIFPR HVEGKKLDRT VWNLSTFHAY VSYHVKFSEG FMHTRMRRRV ESMIQALDQA KPLEKTRSMN
301: NKSFKRLGLN EVNHTNSK
Arabidopsis Description
ARPC2AActin-related protein 2/3 complex subunit 2A [Source:UniProtKB/Swiss-Prot;Acc:Q8LGI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.