Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G377800.1 | Wheat | plastid | 97.71 | 97.96 |
| TraesCS2B01G394800.1 | Wheat | golgi, plastid | 97.71 | 97.71 |
| HORVU2Hr1G090260.1 | Barley | plastid | 94.15 | 90.69 |
| OQU75601 | Sorghum | cytosol, mitochondrion, plasma membrane | 16.79 | 89.19 |
| Os04t0524400-01 | Rice | plastid | 83.21 | 81.95 |
| EES11134 | Sorghum | plastid | 81.93 | 81.11 |
| Zm00001d002980_P001 | Maize | plastid | 76.34 | 75.0 |
| Os03t0390900-01 | Rice | plastid | 31.3 | 59.13 |
| PGSC0003DMT400062339 | Potato | mitochondrion | 60.56 | 55.35 |
| Solyc09g011340.2.1 | Tomato | plastid | 60.05 | 55.14 |
| TraesCS2D01G241700.1 | Wheat | golgi, unclear | 55.47 | 50.93 |
| GSMUA_Achr8P13730_001 | Banana | extracellular, plasma membrane | 64.63 | 38.37 |
| TraesCS1D01G242600.1 | Wheat | golgi | 26.21 | 26.82 |
| TraesCS3D01G330200.1 | Wheat | plastid | 20.36 | 22.54 |
| TraesCS5D01G123000.1 | Wheat | plastid | 22.65 | 16.67 |
| TraesCS7D01G343200.1 | Wheat | plastid | 20.36 | 16.06 |
| TraesCS3D01G341400.1 | Wheat | plastid | 26.21 | 14.31 |
| TraesCS1D01G293100.1 | Wheat | plastid | 24.68 | 13.16 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G374200.1 | EnsemblPlantsGene:TraesCS2D01G374200 | InterPro:RETICULATA-related | PANTHER:PTHR31038 | PANTHER:PTHR31038:SF8 | PFAM:PF11891 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:-:477434003..477436285
Molecular Weight (calculated)
41310.7 Da
IEP (calculated)
7.272
GRAVY (calculated)
0.153
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASVSLSS LASSAAAAAA ISSSPGCPPS KPFHDPKPLH LSVRLFPRFA KPQSLSCSGP HAPRAATGDG SGAGNRGDDS GGNGGKDGGG NDGDGGGEDD
101: YEEAEFGPLL GFSEVARLAA ARGVTLPADM IEAAKDAGIR EVILLRYFDL QAAPWPLAAM IRALSVLRNR MLADPSFLFK VGIEVVIDSC CATLAEVQKR
201: GEDFWAEFEL YAADILIGIV VDIALVGMLA PYVRLGKASA STGLLGRFNR MAGALPSSVF EAERPGCRFT VQQRIGTYFY KGVLYGSVGF VCGIIGQGIC
301: NMIMNAKRSV KKTDEDIPVP PLIKSAALWG VFLAVSSNTR YQIINGLERV VEASPVAKGA PPVALAFTVG VRFANNIYGG MQFIDWARWS GVQ
101: YEEAEFGPLL GFSEVARLAA ARGVTLPADM IEAAKDAGIR EVILLRYFDL QAAPWPLAAM IRALSVLRNR MLADPSFLFK VGIEVVIDSC CATLAEVQKR
201: GEDFWAEFEL YAADILIGIV VDIALVGMLA PYVRLGKASA STGLLGRFNR MAGALPSSVF EAERPGCRFT VQQRIGTYFY KGVLYGSVGF VCGIIGQGIC
301: NMIMNAKRSV KKTDEDIPVP PLIKSAALWG VFLAVSSNTR YQIINGLERV VEASPVAKGA PPVALAFTVG VRFANNIYGG MQFIDWARWS GVQ
001: MAGCAMNLQF SSVVKVRNEI SSFGICNRDF VFRDLAKAMK VPVLRIRGGS GRQRSRLFVV NMSQSPIEPQ SGGFAATEQI KGEGDNSILG KDNVRNLGTD
101: QLENLDIDGN VGDGFNGSDG NGGGGGGGNG GEGDGEGEDY EEKEFGPILK FEEVMKETEA RGATLPSDML EAAKNYGIRK VLLLRYLDLQ SSAGLLGFAI
201: RSWAMLRNRM LADPSFLFKI GAEIVIDSCC ATVAEVQKRG KDFWAEFELY VADLLVGTVV NIALVGMLAP YVRFGQPSAS PGFLGRMVFA YNALPSSVFE
301: AERPGCRFSA QQRLATYFYK GIMYGAVGFG CGIVGQGIAN LIMTAKRNIN KSEENIPVPP LIKSAALWGV FLSVSSNTRY QIINGLERVV EASPFAKKFP
401: PAAMAFTVGV RLANNIYGGM QFVDWARLSG CQ
101: QLENLDIDGN VGDGFNGSDG NGGGGGGGNG GEGDGEGEDY EEKEFGPILK FEEVMKETEA RGATLPSDML EAAKNYGIRK VLLLRYLDLQ SSAGLLGFAI
201: RSWAMLRNRM LADPSFLFKI GAEIVIDSCC ATVAEVQKRG KDFWAEFELY VADLLVGTVV NIALVGMLAP YVRFGQPSAS PGFLGRMVFA YNALPSSVFE
301: AERPGCRFSA QQRLATYFYK GIMYGAVGFG CGIVGQGIAN LIMTAKRNIN KSEENIPVPP LIKSAALWGV FLSVSSNTRY QIINGLERVV EASPFAKKFP
401: PAAMAFTVGV RLANNIYGGM QFVDWARLSG CQ
Arabidopsis Description
REProtein RETICULATA, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFK5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.