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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G298100.1 Wheat plastid 95.25 95.9
TraesCS1B01G307600.1 Wheat plastid 95.39 95.52
Zm00001d010606_P004 Maize plastid 61.74 70.76
TraesCS3D01G341400.1 Wheat plastid 67.71 69.31
KXG22205 Sorghum plastid 69.34 68.87
GSMUA_Achr6P35670_001 Banana plastid 61.06 63.47
GSMUA_AchrUn_... Banana plastid 62.82 61.73
Bra003229.1-P Field mustard plastid 56.72 56.41
CDY31998 Canola plastid 56.72 56.26
CDX67635 Canola plastid 56.72 56.26
AT3G56140.1 Thale cress plastid 56.72 56.11
VIT_13s0067g02090.t01 Wine grape mitochondrion, plastid 56.58 55.67
AT2G40400.1 Thale cress plastid 55.09 55.24
KRH31203 Soybean plastid 56.04 55.21
CDX93185 Canola plastid 55.09 55.16
KRG97671 Soybean plastid 55.9 55.15
Bra017008.1-P Field mustard plastid 55.36 54.91
Solyc06g050620.2.1 Tomato mitochondrion 55.5 54.75
CDY52926 Canola plastid 55.09 54.64
PGSC0003DMT400061517 Potato mitochondrion 55.36 54.62
HORVU1Hr1G070330.11 Barley cytosol 84.12 51.67
TraesCS1D01G242600.1 Wheat golgi 16.55 31.77
TraesCS2D01G374200.1 Wheat plastid 13.16 24.68
TraesCS3D01G330200.1 Wheat plastid 11.8 24.51
TraesCS2D01G241700.1 Wheat golgi, unclear 12.08 20.79
TraesCS5D01G123000.1 Wheat plastid 14.79 20.41
TraesCS7D01G343200.1 Wheat plastid 13.3 19.68
Protein Annotations
EnsemblPlants:TraesCS1D01G293100.1EnsemblPlantsGene:TraesCS1D01G293100Gene3D:3.40.50.11550InterPro:Cofac_haem-bd_domInterPro:IPR006311InterPro:RETICULATA-related
InterPro:TAT_signalPANTHER:PTHR31620PANTHER:PTHR31620:SF6PFAM:PF04187PFAM:PF11891PFscan:PS51318
SEG:segSUPFAM:SSF159501MapMan:35.1:::
Description
No Description!
Coordinates
chr1D:-:392134171..392139034
Molecular Weight (calculated)
79875.0 Da
IEP (calculated)
8.508
GRAVY (calculated)
-0.248
Length
737 amino acids
Sequence
(BLAST)
001: MTHAPLRNAA ASFKPLLPSP RSRLSTKPLN SGASPSSSSP RRSVSASASS RRDLLLLIPS LAAASAVLRA APAAAADDQA SPPPPPAESP APAPLPPPKE
101: KEPDGDESAV SRVYDATVIG EPQAVRREAK GRVWDKLAAA RVVYLGEAEL VPDPDDRVLE LEIVTKLAAR CADAERRMSL ALEAFPCDLQ QQLDDFMSGR
201: IDGSILKLYT SHWPSERWQE YEPLLNFCRD NGIKLVASGT PLQVKRTVQA EGIGGLSKAE RKEYAPPAGS GFISGFRSGR SFIENITSTR DSPFGPNSYL
301: SAQARVVDDY TMSQIVMKEL NGRDPPGLLI VVAGASHLIY GSRGTGVPAR VSKKLPKKGQ VVVLLDPERQ SIRREGQIPV ADFLWYSAAK TCTRNCFDRA
401: EIARVMNAAG RRPEALPQDL QKGIDLGVVS PEILQNFFDL DKNPVMTELI HRFQGFRERL LADPKFLQRL AIEEAISIST TLLAQYERRK GRFFEEIDYV
501: LTDTIRGSVV DFFTVWLPAP TISVLSFTDN DSGQSLGFVR GLLGSLPDNA FQKNTFGQNW NMNQRVAAVI VGGLKLAGVG FISSVGAGVS SDLLYAARGV
601: LKPSVSVGAG RKRAPVLKSA AVYSCFLGTS ANLRYQIIAG LLEHRLGESL ATQYNQPLLA GLLSFVARTA NSYLGTQQWV DLARYTGIQK IQEQLPSDEV
701: TAPPETSQLE DGRTDVQNPD ESSSSSSNAD RSSDPTK
Best Arabidopsis Sequence Match ( AT2G40400.1 )
(BLAST)
001: MKPTTNGGLL ASQSSSSFSF PRFRGQLPII FSANNNQKKK NLPNPNVVTL CLHSHSNVSS SQIAVTRRAI LVAPPLLAAA ASLFLSISSA ASAETSAESV
101: ALPPVATAPP PPPVEKEEAI TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR CIESDRQLSL ALEAFPLDLQ
201: EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL
301: TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA
401: ARPCSRNCFD RAEIARVMNA AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN RLAIEEAISI TTTLVAQYEK
501: RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA
601: VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT
701: QKSVTTSNQI PEVASQSTVE YSTTEEASMD DLKNQ
Arabidopsis Description
RER5Protein RETICULATA-RELATED 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.