Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93185 | Canola | plastid | 86.94 | 86.82 |
| Bra017008.1-P | Field mustard | plastid | 87.07 | 86.14 |
| CDY52926 | Canola | plastid | 86.94 | 86.0 |
| AT3G56140.1 | Thale cress | plastid | 79.59 | 78.52 |
| HORVU5Hr1G020100.2 | Barley | cytosol | 21.9 | 68.51 |
| VIT_13s0067g02090.t01 | Wine grape | mitochondrion, plastid | 67.07 | 65.82 |
| PGSC0003DMT400061517 | Potato | mitochondrion | 64.76 | 63.72 |
| Solyc06g050620.2.1 | Tomato | mitochondrion | 64.35 | 63.32 |
| GSMUA_Achr6P35670_001 | Banana | plastid | 60.14 | 62.34 |
| KRG97671 | Soybean | plastid | 63.27 | 62.25 |
| KRH31203 | Soybean | plastid | 62.86 | 61.76 |
| TraesCS3A01G347800.1 | Wheat | plastid | 58.78 | 60.0 |
| TraesCS3B01G379700.2 | Wheat | mitochondrion, plastid | 58.78 | 59.92 |
| TraesCS3D01G341400.1 | Wheat | plastid | 58.64 | 59.86 |
| GSMUA_AchrUn_... | Banana | plastid | 60.0 | 58.8 |
| EES03820 | Sorghum | mitochondrion | 58.37 | 58.45 |
| Zm00001d043023_P002 | Maize | plastid | 58.37 | 58.13 |
| HORVU3Hr1G088220.12 | Barley | mitochondrion, plastid | 57.69 | 57.92 |
| Os01t0826900-01 | Rice | cytosol, endoplasmic reticulum, plastid | 58.1 | 57.16 |
| Zm00001d010606_P004 | Maize | plastid | 49.39 | 56.45 |
| TraesCS1D01G293100.1 | Wheat | plastid | 55.24 | 55.09 |
| TraesCS1A01G298100.1 | Wheat | plastid | 54.83 | 55.05 |
| TraesCS1B01G307600.1 | Wheat | plastid | 54.69 | 54.62 |
| KXG22205 | Sorghum | plastid | 54.15 | 53.64 |
| HORVU1Hr1G070330.11 | Barley | cytosol | 54.29 | 33.25 |
| AT5G12470.1 | Thale cress | plastid | 16.73 | 31.87 |
| AT3G08630.1 | Thale cress | plastid | 12.11 | 26.25 |
| AT3G08640.1 | Thale cress | plastid | 11.7 | 25.52 |
| AT5G22790.1 | Thale cress | plastid | 12.93 | 21.94 |
| AT2G37860.4 | Thale cress | plastid | 12.65 | 21.53 |
| AT5G24690.1 | Thale cress | plastid | 13.61 | 19.19 |
Protein Annotations
| Gene3D:3.40.50.11550 | MapMan:35.1 | EntrezGene:818633 | ProteinID:AAD25674.1 | ProteinID:AEC09822.1 | ProteinID:AEC09823.1 |
| EMBL:AF410285 | EMBL:AK226837 | ArrayExpress:AT2G40400 | EnsemblPlantsGene:AT2G40400 | RefSeq:AT2G40400 | TAIR:AT2G40400 |
| RefSeq:AT2G40400-TAIR-G | EnsemblPlants:AT2G40400.1 | TAIR:AT2G40400.1 | EMBL:AY102131 | Unigene:At.14284 | InterPro:Cofac_haem-bd_dom |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009719 | GO:GO:0009741 |
| GO:GO:0009987 | GO:GO:0015995 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031969 | RefSeq:NP_565930.1 |
| RefSeq:NP_850329.1 | PFAM:PF04187 | PFAM:PF11891 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31620 |
| PANTHER:PTHR31620:SF2 | UniProt:Q9SIY5 | InterPro:RETICULATA-related | SUPFAM:SSF159501 | UniParc:UPI000009EAE6 | SEG:seg |
Description
RER5Protein RETICULATA-RELATED 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY5]
Coordinates
chr2:+:16869189..16872906
Molecular Weight (calculated)
80705.7 Da
IEP (calculated)
8.305
GRAVY (calculated)
-0.129
Length
735 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPTTNGGLL ASQSSSSFSF PRFRGQLPII FSANNNQKKK NLPNPNVVTL CLHSHSNVSS SQIAVTRRAI LVAPPLLAAA ASLFLSISSA ASAETSAESV
101: ALPPVATAPP PPPVEKEEAI TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR CIESDRQLSL ALEAFPLDLQ
201: EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL
301: TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA
401: ARPCSRNCFD RAEIARVMNA AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN RLAIEEAISI TTTLVAQYEK
501: RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA
601: VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT
701: QKSVTTSNQI PEVASQSTVE YSTTEEASMD DLKNQ
101: ALPPVATAPP PPPVEKEEAI TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR CIESDRQLSL ALEAFPLDLQ
201: EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL
301: TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA
401: ARPCSRNCFD RAEIARVMNA AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN RLAIEEAISI TTTLVAQYEK
501: RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA
601: VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT
701: QKSVTTSNQI PEVASQSTVE YSTTEEASMD DLKNQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.