Factsheet for HORVU5Hr1G020100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G088220.12	Barley	mitochondrion, plastid	93.19	29.92
EES03820	Sorghum	mitochondrion	87.23	27.93
Zm00001d043023_P002	Maize	plastid	86.81	27.64
Os01t0826900-01	Rice	cytosol, endoplasmic reticulum, plastid	84.26	26.51
GSMUA_Achr6P35670_001	Banana	plastid	75.32	24.96
GSMUA_AchrUn_...	Banana	plastid	77.02	24.13
VIT_13s0067g02090.t01	Wine grape	mitochondrion, plastid	72.34	22.7
KRG97671	Soybean	plastid	71.49	22.49
KRH31203	Soybean	plastid	71.49	22.46
Solyc06g050620.2.1	Tomato	mitochondrion	71.06	22.36
PGSC0003DMT400061517	Potato	mitochondrion	69.79	21.95
AT2G40400.1	Thale cress	plastid	68.51	21.9
Bra003229.1-P	Field mustard	plastid	68.09	21.59
CDX67635	Canola	plastid	68.09	21.53
CDY31998	Canola	plastid	68.09	21.53
AT3G56140.1	Thale cress	plastid	67.66	21.34
CDX93185	Canola	plastid	65.96	21.06
CDY52926	Canola	plastid	65.11	20.59
Bra017008.1-P	Field mustard	plastid	65.11	20.59
HORVU1Hr1G070330.11	Barley	cytosol	73.62	14.42
HORVU3Hr1G109880.1	Barley	plastid	11.06	6.68
HORVU7Hr1G082560.2	Barley	mitochondrion	9.36	5.25
HORVU2Hr1G090260.1	Barley	plastid	8.94	5.15
HORVU5Hr1G030040.1	Barley	plastid	11.06	4.74
HORVU2Hr1G049760.6	Barley	cytosol, peroxisome	6.81	4.49
HORVU3Hr1G079620.1	Barley	mitochondrion, plastid	7.66	4.34
HORVU0Hr1G000510.2	Barley	cytosol	1.7	1.75

Protein Annotations

EnsemblPlants:HORVU5Hr1G020100.2	EnsemblPlantsGene:HORVU5Hr1G020100	InterPro:Cofac_haem-bd_dom	PANTHER:PTHR31620	PANTHER:PTHR31620:SF6	PFAM:PF04187
SEG:seg	SUPFAM:SSF159501	UniParc:UPI000B47B7EE	UniProt:A0A287QJN9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:-:90541040..90549352

Molecular Weight (calculated)

25812.3 Da

IEP (calculated)

9.698

GRAVY (calculated)

-0.189

Length

235 amino acids

Sequence
(BLAST)

001: HLHVVRTVQA EGIKGLSKEQ RKLYAPPAGS GFISGFTSIT GRSLIDKTSS SRVSPFGPSS YLSAQARVVD DYTMSQIIMK EISTGDPSGM LVVVTGASHV
101: MYGARGIGVP ARISKKMQKK KQVVILLDPE RQGIRREGEI PVADLLWYSA AKPCSRNCFD RAEIARVMNA AGRRREALPQ DIQKGIDRGV VSPEILQNFF
201: DLEKYPVVDE LIHRYIGFIE GMVGGGYIDR VSCPE

Best Arabidopsis Sequence Match ( AT2G40400.1 )
(BLAST)

001: MKPTTNGGLL ASQSSSSFSF PRFRGQLPII FSANNNQKKK NLPNPNVVTL CLHSHSNVSS SQIAVTRRAI LVAPPLLAAA ASLFLSISSA ASAETSAESV
101: ALPPVATAPP PPPVEKEEAI TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR CIESDRQLSL ALEAFPLDLQ
201: EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL
301: TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA
401: ARPCSRNCFD RAEIARVMNA AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN RLAIEEAISI TTTLVAQYEK
501: RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA
601: VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT
701: QKSVTTSNQI PEVASQSTVE YSTTEEASMD DLKNQ

Arabidopsis Description

RER5Protein RETICULATA-RELATED 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.