Factsheet for Os01t0826900-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

plastid 5
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G020100.2	Barley	cytosol	26.51	84.26
EES03820	Sorghum	mitochondrion	80.32	81.74
TraesCS3B01G379700.2	Wheat	mitochondrion, plastid	77.91	80.72
TraesCS3D01G341400.1	Wheat	plastid	77.51	80.42
TraesCS3A01G347800.1	Wheat	plastid	77.11	80.0
Zm00001d043023_P002	Maize	plastid	78.98	79.95
HORVU3Hr1G088220.12	Barley	mitochondrion, plastid	76.04	77.6
Os05t0474600-02	Rice	cytosol	43.37	74.65
GSMUA_Achr6P35670_001	Banana	plastid	65.33	68.83
GSMUA_AchrUn_...	Banana	plastid	67.07	66.8
VIT_13s0067g02090.t01	Wine grape	mitochondrion, plastid	60.78	60.61
PGSC0003DMT400061517	Potato	mitochondrion	58.5	58.5
Solyc06g050620.2.1	Tomato	mitochondrion	58.37	58.37
KRG97671	Soybean	plastid	58.23	58.23
AT2G40400.1	Thale cress	plastid	57.16	58.1
KRH31203	Soybean	plastid	58.1	58.02
AT3G56140.1	Thale cress	plastid	57.7	57.85
Bra003229.1-P	Field mustard	plastid	56.76	57.22
CDY31998	Canola	plastid	56.89	57.2
CDX67635	Canola	plastid	56.76	57.07
CDX93185	Canola	plastid	56.09	56.93
CDY52926	Canola	plastid	55.82	56.12
Bra017008.1-P	Field mustard	plastid	55.82	56.12
Os05t0388600-01	Rice	plasma membrane	17.0	33.6
Os01t0957200-01	Rice	plastid	17.14	32.9
Os01t0812900-01	Rice	plastid	12.18	26.15
Os04t0524400-01	Rice	plastid	12.99	24.31
Os07t0240300-01	Rice	plastid	11.78	19.86
Os03t0390900-01	Rice	plastid	4.95	17.79
Os12t0283800-01	Rice	extracellular, plastid	5.22	16.53
Os05t0474500-01	Rice	cytosol	0.4	0.59

Protein Annotations

EnsemblPlants:Os01t0826900-01	EnsemblPlantsGene:Os01g0826900	Gene3D:3.40.50.11550	InterPro:Cofac_haem-bd_dom	InterPro:RETICULATA-related	PANTHER:PTHR31620
PANTHER:PTHR31620:SF6	PFAM:PF04187	PFAM:PF11891	ProteinID:BAS75024.1	SEG:seg	SUPFAM:SSF159501
UniParc:UPI000393AAC4	UniProt:A0A0P0V9W5	MapMan:35.1	:	:	:

Description

Domain of unknown function DUF399 domain containing protein. (Os01t0826900-01)

Coordinates

chr1:-:35386776..35391613

Molecular Weight (calculated)

81475.4 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.121

Length

747 amino acids

Sequence
(BLAST)

001: CSLSGLAPFP LAAGASAPRL RLRRMLPPAP TRNPGACRFI PLLPPKPLLS PAAAAASSRG GLCVAAASRR DFLLLVPSIA AASTVLQSLP LSASAADDEK
101: QAASPAPGPA AAPAPTSAGE PEAEALSRVY DATVIGEPQA VGKDARRRVW EKLMAARVVY LGEAELVPDR DDRVLELEVV RKLAARCAEA GRSISLALEA
201: FPCNLQEQLN QFMDRRIDGN NLRLYTSHWA PERWQEYEPL LNYCRDNGVK LVACGTPLEV SRTVQAEGIR GLSKAQRKLY APPAGSGFIS GFTSISGRSL
301: IDKISAIHGS PFGPSSYLSA QARVVDDYTM SQKIMKEITN GYPSGMLVVV TGSSHVIYGS RGIGVPARIS KKMQKKKQVV VLLNPERQGI RREGEIPVAD
401: FLWYSAAKPC SRNCFDRAEI ARVMNAAGRR REALPQDLQK GIDLGVVSPE ILQNFFDLEK YPVMAELIHR FQGFRERLLA DPKFLHRLAI EEGISITTTL
501: IAQYEKRKGR FLEEIDYVLT DTIRGSVVDF FTVWLPAPTI SLLSLGDNGS GESLELLKGL LGSLPDNAFQ KGIMGQSWNT NQRFASVLMG GIKLAGVGFI
601: SSIGAGVASD VLYAARRVLR PSTSVETARR RTPIWKSATV YSCFLGTSAN LRYQVIAGLV EHRLGEYLMA YYNQPLLANL LSFVSRTINS YWGTQQWIDL
701: ARATGLQTSK KELPSPEISN LPDMPLLECG TTEVQNMDDS NKQQPMK

Best Arabidopsis Sequence Match ( AT2G40400.1 )
(BLAST)

001: MKPTTNGGLL ASQSSSSFSF PRFRGQLPII FSANNNQKKK NLPNPNVVTL CLHSHSNVSS SQIAVTRRAI LVAPPLLAAA ASLFLSISSA ASAETSAESV
101: ALPPVATAPP PPPVEKEEAI TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR CIESDRQLSL ALEAFPLDLQ
201: EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL
301: TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA
401: ARPCSRNCFD RAEIARVMNA AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN RLAIEEAISI TTTLVAQYEK
501: RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA
601: VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT
701: QKSVTTSNQI PEVASQSTVE YSTTEEASMD DLKNQ

Arabidopsis Description

RER5Protein RETICULATA-RELATED 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.