Factsheet for Os05t0474500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88129	Canola	cytosol	6.27	1.85
Os05t0474600-02	Rice	cytosol	0.98	1.15
GSMUA_Achr2P05940_001	Banana	cytosol, extracellular, plasma membrane	0.59	0.68
VIT_12s0034g01330.t01	Wine grape	cytosol	0.2	0.48
HORVU7Hr1G082560.2	Barley	mitochondrion	0.39	0.48
Os12t0283800-01	Rice	extracellular, plastid	0.2	0.42
TraesCS7A01G335500.1	Wheat	plastid	0.39	0.4
TraesCS7B01G247100.1	Wheat	plastid	0.39	0.4
TraesCS7D01G343200.1	Wheat	plastid	0.39	0.4
Os01t0826900-01	Rice	cytosol, endoplasmic reticulum, plastid	0.59	0.4
KRH44019	Soybean	mitochondrion, nucleus, plastid	0.39	0.39
KRH10440	Soybean	endoplasmic reticulum, nucleus, plastid	0.39	0.38
Bra009789.1-P	Field mustard	plastid	0.39	0.38
Os01t0812900-01	Rice	plastid	0.2	0.29
Os05t0388600-01	Rice	plasma membrane	0.2	0.26
Os01t0957200-01	Rice	plastid	0.2	0.26
Bra036522.1-P	Field mustard	plastid	0.2	0.19
VIT_12s0034g01370.t01	Wine grape	plastid	0.2	0.19
AT5G24690.1	Thale cress	plastid	0.2	0.19
PGSC0003DMT400061143	Potato	plastid	0.2	0.19
Solyc01g104270.2.1	Tomato	plastid	0.2	0.19
CDX87117	Canola	plastid	0.2	0.19
CDX80466	Canola	plastid	0.2	0.19
Solyc10g045620.1.1	Tomato	cytosol	0.0	0.0
Solyc10g045630.1.1	Tomato	plastid	0.0	0.0
Os07t0240300-01	Rice	plastid	0.0	0.0
Os04t0524400-01	Rice	plastid	0.0	0.0
Os03t0390900-01	Rice	plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.1270.60	MapMan:22.5.5.3.6	Gene3D:3.30.1520.10	UniProt:A0A0P0WNH2	InterPro:AH/BAR_dom_sf	ProteinID:BAS94516.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001683
InterPro:IPR027267	InterPro:IPR036871	EnsemblPlantsGene:Os05g0474500	EnsemblPlants:Os05t0474500-01	PFAM:PF00787	PFAM:PF09325
PFscan:PS50195	PANTHER:PTHR10555	PANTHER:PTHR10555:SF146	InterPro:PX_dom_sf	InterPro:Phox	SMART:SM00312
SUPFAM:SSF103657	SUPFAM:SSF64268	UniParc:UPI0000E12535	InterPro:Vps5_C	SEG:seg	:

Description

Phox-like domain containing protein. (Os05t0474500-01)

Coordinates

chr5:+:23287870..23291871

Molecular Weight (calculated)

56223.3 Da

IEP (calculated)

7.359

GRAVY (calculated)

-0.441

Length

510 amino acids

Sequence
(BLAST)

001: MMAAEPSPAA ASAVEDLETL PLDSSYSSAP ATDPLLRPPA SPSAASAAAG GDHDPFVIDD DFLVDEEDDD DVGPPAPTAI PLVAAAARAP EFARIAVSDP
101: KKHAEPTSGA AGVIPGSGSY FSYLITTRVG EAEVRVRRRF RDVVALADRL AAAHRGLFIP ARPDKSVVEG QVMQRHDFVN QRCSALQRYL RRLAAHPVVG
201: HSPDLRTFLT EPGAIPAFEG EQPRYWTTTL SSAAPSTPAK AGRDLFGMFK GLKQTVVNGM VATKPPPVEE ETDTEFLAHK ARFQDLQQQL TTTSQQAEAL
301: VKARDDLRTT TAHLGMTLIK LAKFEREQAT CSPQRRRAAD INNFGSSVVK FSRSQAKLNS EIVKHLGSIH EYLEMMISVH HAFTDRSNAL HHVQSLSADL
401: FFLHTRAEKL ESVSSRSRSI DQEWTRHQKL GGLKETISAT EAAKSHALKE YENIKENNTI EIKRFDKDRR RDFVQMLKGF IVNQVSYSDH YANMWAKVAD
501: ETKVYAKRSN

Best Arabidopsis Sequence Match ( AT5G58440.1 )
(BLAST)

001: MMGSENADGF EETNLNAQRD DMENLDLGVD GGDHPLKISD VNGDTSNSGY RSAMSTLSNV RDPLSPPPTV MIPADSDPLL APSSYEDFRS SFSSKPISSD
101: NSYIEPPSYA DVIFSPFDEN SDSEINGTED NSLHSQFSDS LSRSPSSSSS DYIKITVSNP QKEQEISNSI VGGNTYITYQ ITTRTNLPDF GGPSEFSVRR
201: RFRDVVTLAD RLAETYRGFC IPPRPDKSVV ESQVMQKQEF VEQRRVALEK YLRRLSAHPV IRNSDELKVF LQVQGKLPLP MSTDVASRML DGAVKLPKQL
301: FGEGGASAVP VTEVGQPARG GRDLLRLFKE LRQSVSNDWG GSKPPVVEED KEFLEKKEKM HDLEQQIINA SQQAESLVKA QQDMGETMGE LGLAFIKLTK
401: FENEEAVCNP QRTRANDMKN LATAAVKASR FYRELNSQTV KHLDTLHEYL GMMMAVQGAF ADRSSALLTV QTLLSELPSL QTRVEKLEAA SSKVFGGDKS
501: RIRKIEELKE TIKVTEDAKN VAIKGYERIK ENNRSEVERL DRERRADFMN MMKGFVVNQV GYAEKMGNVW AKVAEETSQY DREKQSS

Arabidopsis Description

SNX2ASNX2a [Source:UniProtKB/TrEMBL;Acc:A0A178UPE2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.