Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80466 | Canola | plastid | 88.68 | 87.67 |
| Bra009789.1-P | Field mustard | plastid | 88.29 | 86.96 |
| Bra036522.1-P | Field mustard | plastid | 85.22 | 85.38 |
| CDX87117 | Canola | plastid | 85.99 | 85.17 |
| VIT_12s0034g01330.t01 | Wine grape | cytosol | 28.6 | 71.29 |
| VIT_12s0034g01370.t01 | Wine grape | plastid | 70.63 | 70.63 |
| GSMUA_Achr2P05940_001 | Banana | cytosol, extracellular, plasma membrane | 58.73 | 69.86 |
| KRH44019 | Soybean | mitochondrion, nucleus, plastid | 66.79 | 67.05 |
| Solyc10g045620.1.1 | Tomato | cytosol | 43.38 | 66.67 |
| PGSC0003DMT400061143 | Potato | plastid | 66.99 | 66.6 |
| KRH10440 | Soybean | endoplasmic reticulum, nucleus, plastid | 66.79 | 66.54 |
| Solyc01g104270.2.1 | Tomato | plastid | 66.79 | 66.41 |
| Os12t0283800-01 | Rice | extracellular, plastid | 28.41 | 62.71 |
| Zm00001d041036_P001 | Maize | cytosol | 40.5 | 61.34 |
| HORVU7Hr1G082560.2 | Barley | mitochondrion | 48.75 | 60.62 |
| Solyc10g045630.1.1 | Tomato | plastid | 30.33 | 60.31 |
| EES16982 | Sorghum | plastid | 57.39 | 55.58 |
| TraesCS7D01G343200.1 | Wheat | plastid | 52.21 | 54.62 |
| TraesCS5B01G110100.1 | Wheat | golgi | 55.66 | 54.51 |
| TraesCS5A01G110400.1 | Wheat | plastid | 55.66 | 54.41 |
| TraesCS7A01G335500.1 | Wheat | plastid | 51.63 | 54.34 |
| TraesCS7B01G247100.1 | Wheat | plastid | 51.82 | 54.22 |
| Zm00001d023791_P002 | Maize | plasma membrane | 55.85 | 54.19 |
| TraesCS5D01G123000.1 | Wheat | plastid | 55.28 | 53.93 |
| HORVU5Hr1G030040.1 | Barley | plastid | 55.28 | 52.55 |
| CDX88129 | Canola | cytosol | 87.33 | 26.3 |
| AT3G08630.1 | Thale cress | plastid | 15.16 | 23.3 |
| AT3G08640.1 | Thale cress | plastid | 14.4 | 22.26 |
| AT5G12470.1 | Thale cress | plastid | 15.16 | 20.47 |
| AT2G37860.4 | Thale cress | plastid | 16.12 | 19.44 |
| AT5G22790.1 | Thale cress | plastid | 16.12 | 19.4 |
| Os05t0474600-02 | Rice | cytosol | 15.36 | 18.43 |
| AT3G56140.1 | Thale cress | plastid | 20.35 | 14.23 |
| AT2G40400.1 | Thale cress | plastid | 19.19 | 13.61 |
| Os05t0474500-01 | Rice | cytosol | 0.19 | 0.2 |
Protein Annotations
| MapMan:35.1 | EntrezGene:832541 | ProteinID:AED93350.1 | EMBL:AF370204 | EMBL:AK229775 | EMBL:AK229818 |
| EMBL:AK229879 | EMBL:AK229887 | EMBL:AK229942 | EMBL:AK229959 | EMBL:AK230063 | EMBL:AK230067 |
| EMBL:AK230098 | EMBL:AK230099 | EMBL:AK230309 | EMBL:AK230320 | EMBL:AK230414 | ArrayExpress:AT5G24690 |
| EnsemblPlantsGene:AT5G24690 | RefSeq:AT5G24690 | TAIR:AT5G24690 | RefSeq:AT5G24690-TAIR-G | EnsemblPlants:AT5G24690.1 | TAIR:AT5G24690.1 |
| EMBL:AY056434 | EMBL:AY133867 | Unigene:At.49058 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009706 |
| GO:GO:0009941 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_197857.2 | PFAM:PF11891 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31038 | PANTHER:PTHR31038:SF2 | UniProt:Q93W02 | InterPro:RETICULATA-related | UniParc:UPI00000A7079 | SEG:seg |
Description
AT5g24690/MXC17_8 [Source:UniProtKB/TrEMBL;Acc:Q93W02]
Coordinates
chr5:-:8455457..8458756
Molecular Weight (calculated)
56815.5 Da
IEP (calculated)
9.410
GRAVY (calculated)
-0.133
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHMVFQSVV APKPLSPLKP CLPIPRPLVT LPCKLRRGFV RASSSSFLVD DSVSGLERCL QLPSGVELGT SSSGSFSAST QMCPVMKGKF GSVGAVTLEK
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.