Factsheet for TraesCS7A01G335500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G082560.2	Barley	mitochondrion	81.41	96.18
TraesCS7D01G343200.1	Wheat	plastid	94.34	93.78
TraesCS7B01G247100.1	Wheat	plastid	93.54	92.97
GSMUA_Achr2P05940_001	Banana	cytosol, extracellular, plasma membrane	52.73	59.59
VIT_12s0034g01330.t01	Wine grape	cytosol	23.84	56.46
TraesCS5A01G110400.1	Wheat	plastid	60.4	56.1
Solyc10g045620.1.1	Tomato	cytosol	36.16	52.8
VIT_12s0034g01370.t01	Wine grape	plastid	55.15	52.4
Bra009789.1-P	Field mustard	plastid	55.56	51.98
KRH44019	Soybean	mitochondrion, nucleus, plastid	54.34	51.83
CDX80466	Canola	plastid	55.15	51.8
AT5G24690.1	Thale cress	plastid	54.34	51.63
KRH10440	Soybean	endoplasmic reticulum, nucleus, plastid	54.55	51.63
PGSC0003DMT400061143	Potato	plastid	54.14	51.15
Bra036522.1-P	Field mustard	plastid	53.54	50.96
Solyc01g104270.2.1	Tomato	plastid	53.94	50.95
CDX87117	Canola	plastid	53.74	50.57
Solyc10g045630.1.1	Tomato	plastid	24.85	46.95
TraesCS1A01G242600.1	Wheat	plastid	16.77	21.61
TraesCS3A01G337100.1	Wheat	golgi, plastid, unclear	14.95	20.96
TraesCS2A01G377800.1	Wheat	plastid	16.57	20.92
TraesCS2A01G234300.1	Wheat	mitochondrion, plastid	16.36	19.01
Os05t0474600-02	Rice	cytosol	14.75	16.82
CDX88129	Canola	cytosol	55.15	15.78
TraesCS3A01G347800.1	Wheat	plastid	19.6	13.47
TraesCS1A01G298100.1	Wheat	plastid	19.8	13.39
Os05t0474500-01	Rice	cytosol	0.4	0.39

Protein Annotations

EnsemblPlants:TraesCS7A01G335500.1	EnsemblPlantsGene:TraesCS7A01G335500	InterPro:RETICULATA-related	PANTHER:PTHR31038	PANTHER:PTHR31038:SF2	PFAM:PF11891
SEG:seg	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:490967365..490972045

Molecular Weight (calculated)

54708.0 Da

IEP (calculated)

10.229

GRAVY (calculated)

-0.261

Length

495 amino acids

Sequence
(BLAST)

001: MASAASLAVS HHLLPAAPAR SQPRPPARLV RLPRTRLRVA AISSSPSPPS RRDRAAAGLE RCLAATPAPA FAPPEMKGGR QRGSFGAATL QKAKLDLSQK
101: RLKGVQPELA TGGGGGDNGK RIGYGGGNSG DDDGDDDDYF EDSDDGDEES GFFRRRIIIQ ELFKREFVDA VLQEWYKTMS NLPAGLRQAH EMGLVSSSQM
201: VKYLSMFGRP TKARYFSRAF PDFFSRDLVG RMLADPSFLH KMTFELLATV STSVCWEMKN RKERFQEEWD LVFLNVVTAT VCNLAVFSSL APCRSYMIQK
301: LPNNIFEKSY PFMRQFGLLR RTQSLFSKAA ELCLGGLIVG SIQGGLSNIL SAGRERRLSM TVPSISNNAL SYGAYYGLYA NLRYQILCGL DRSMANHFDV
401: LGVTIFFGTA MRLLNIQIGE LSRRAWLGEG ADLLNSDNLL RTYNGPAAEL GINQQAEWFM SKNAIVSGLE LLGIKYGAPK DASPKLRRKR IVRKK

Best Arabidopsis Sequence Match ( AT5G24690.1 )
(BLAST)

001: MSHMVFQSVV APKPLSPLKP CLPIPRPLVT LPCKLRRGFV RASSSSFLVD DSVSGLERCL QLPSGVELGT SSSGSFSAST QMCPVMKGKF GSVGAVTLEK
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S

Arabidopsis Description

AT5g24690/MXC17_8 [Source:UniProtKB/TrEMBL;Acc:Q93W02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.