Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009789.1-P | Field mustard | plastid | 30.23 | 98.87 |
| CDX80466 | Canola | plastid | 29.36 | 96.39 |
| CDX87117 | Canola | plastid | 26.59 | 87.45 |
| AT5G24690.1 | Thale cress | plastid | 26.3 | 87.33 |
| VIT_12s0034g01330.t01 | Wine grape | cytosol | 8.67 | 71.77 |
| GSMUA_Achr2P05940_001 | Banana | cytosol, extracellular, plasma membrane | 18.03 | 71.23 |
| VIT_12s0034g01370.t01 | Wine grape | plastid | 21.33 | 70.83 |
| KRH44019 | Soybean | mitochondrion, nucleus, plastid | 20.46 | 68.21 |
| KRH10440 | Soybean | endoplasmic reticulum, nucleus, plastid | 20.23 | 66.92 |
| PGSC0003DMT400061143 | Potato | plastid | 20.0 | 66.03 |
| Solyc01g104270.2.1 | Tomato | plastid | 19.94 | 65.84 |
| Solyc10g045620.1.1 | Tomato | cytosol | 12.77 | 65.19 |
| Os12t0283800-01 | Rice | extracellular, plastid | 8.67 | 63.56 |
| Zm00001d041036_P001 | Maize | cytosol | 12.43 | 62.5 |
| HORVU7Hr1G082560.2 | Barley | mitochondrion | 14.91 | 61.58 |
| Solyc10g045630.1.1 | Tomato | plastid | 9.08 | 59.92 |
| EES16982 | Sorghum | plastid | 17.34 | 55.76 |
| TraesCS7A01G335500.1 | Wheat | plastid | 15.78 | 55.15 |
| TraesCS7B01G247100.1 | Wheat | plastid | 15.84 | 55.02 |
| TraesCS5B01G110100.1 | Wheat | golgi | 16.88 | 54.89 |
| TraesCS7D01G343200.1 | Wheat | plastid | 15.78 | 54.82 |
| TraesCS5A01G110400.1 | Wheat | plastid | 16.88 | 54.78 |
| TraesCS5D01G123000.1 | Wheat | plastid | 16.76 | 54.31 |
| Zm00001d023791_P002 | Maize | plasma membrane | 16.76 | 54.0 |
| HORVU5Hr1G030040.1 | Barley | plastid | 16.71 | 52.74 |
| CDY27990 | Canola | plastid | 3.87 | 20.87 |
| CDX97204 | Canola | plastid | 4.51 | 20.86 |
| CDY35990 | Canola | plastid | 3.87 | 20.81 |
| CDX70479 | Canola | plastid | 4.51 | 20.8 |
| CDY26956 | Canola | plastid | 4.91 | 20.19 |
| CDX78491 | Canola | plastid | 4.34 | 19.95 |
| CDX74930 | Canola | plastid | 4.86 | 19.86 |
| CDX91387 | Canola | plastid | 4.86 | 19.81 |
| CDY53965 | Canola | plastid | 4.34 | 19.79 |
| CDX92336 | Canola | plastid | 4.8 | 19.62 |
| CDY66586 | Canola | plastid | 3.87 | 19.59 |
| CDY22156 | Canola | plastid | 3.82 | 19.35 |
| CDY07766 | Canola | plastid | 4.57 | 19.08 |
| CDY59488 | Canola | plastid | 4.57 | 18.85 |
| Os05t0474600-02 | Rice | cytosol | 4.57 | 18.2 |
| CDX88782 | Canola | plastid | 5.09 | 15.22 |
| CDY31998 | Canola | plastid | 6.42 | 14.94 |
| CDX71014 | Canola | plastid | 5.09 | 14.89 |
| CDX67635 | Canola | plastid | 6.36 | 14.8 |
| CDX93185 | Canola | plastid | 6.18 | 14.54 |
| CDY52926 | Canola | plastid | 6.24 | 14.54 |
| CDY67668 | Canola | mitochondrion | 0.64 | 6.51 |
| Os05t0474500-01 | Rice | cytosol | 1.85 | 6.27 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:22.1.4.4 | EnsemblPlants:CDX88129 | ProteinID:CDX88129 | ProteinID:CDX88129.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00147569001 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| PFAM:PF11891 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR45521 | InterPro:RETICULATA-related |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004EF1CDE | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
BnaA06g27200D
Coordinates
chrLK031854:-:796991..811198
Molecular Weight (calculated)
185668.0 Da
IEP (calculated)
6.977
GRAVY (calculated)
-0.148
Length
1730 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKKKKKKIRI TPNQTYSFLC SMEFLTRSSG GDGPLVAFGS TDGVIRVLSM ITWKLARRYT GGHKGSIYCL MNFMASSGEA LLVSGGSDGL LVLWSADHGS
0101: DSRELVPKLS LKAHDGGVVA VELSRVSGSA PQLITIGADK TLAIWDTMTF KELRRIKPVP KLACHSVASW CHPRAPNLDI LTCVKDSHIW SIEHPTYSAL
0201: TRPLCELSSL VPPQVLATHR KLRVYCMVAH PLQPHLVATG TNVGIIVSEF DPRAIPSAAP LPALSGSREN SAVYILGREL KLLNFQISNT ANPSLGNNSA
0301: LSESGMAKGD SGEQLTVKQT KKQIVAPVPH DSYSVLSVSS SGKYVAVVWP DILYFSIYKV SDWTIVDSGS ARLLAWDTCR DRFAILESVL PQRMPIIPKG
0401: GSSRKAKEAA AAAAQAAAAA NAASSASVQV RILLDDGTSN ILMRSVGGRS EPVIGLHGGA LLGIGYRTSR RISPVAASAI STIQSMPLSG FGNSNVSSFS
0501: SYDDGSSQRS TESAPLNYQL YSWDNFEPVG GMLPQPEWTA WDQTVEYCAF AYQKYMVISS LRPQYRYLGD VAISHATGAV WHRRQLFVAT PTTIECVFVD
0601: AGVSEIDIET MKMKEEIKLK EAQARAVAEH GELALITVEG AQNAKQERIL LRPPMLQVVR LASFQNAPSV PPFLSLPRQS RGDGDDMDER RASEVAVGGG
0701: GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLSHPGIR CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR
0801: LEFDLAMQSN DLKRALHCLL TMSNSRDIGQ DGLGLDLSDI LSLTAEKKED VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG
0901: HELRGLALRL ANHGELTRLS GLINNLISIG LGRESAFAAA VLGDNALMEK AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEQ APSSKTDAAS
1001: AFLASLEDPK LTSLSDASTK PPIEILPPGM SSIFASISAP KKPLPTLKPQ EPTKPLAVEE PAKPLAIEAP PSSEQPQTES APETAADPES AAPETAAASE
1101: SAAPETAAVS ESEARETAAG SESAAPETAA VAETAEHLDK PVTETVSEPP VVEETPSEEK SVPSSTPNTE TALGATEVDS QTMPPPPPPE PVTTTVKPTE
1201: NAATGRQQSV VAPKPLSPLK PSLPIPRPIA TLPCKLRRSC SIRASSSSSL IDSVGDSVSG LERCLQLQFS GGSGTSSSGS ASPSAQMCPE MKGGKFGSVG
1301: AVTLEKGKLD MTQKKVESTP EIATGGGGGD IGKSVNFGGG DGGDDDGDDD DYFDEFDDDD DGDEGGLFRR RMFLAELFDR KFVDAVLNEW QKTMMDLPAG
1401: LRQAYEMGLV SSAQMVKFLA INARPTTTRF ISRALPQGLS RAFVGRMLAD PSFLYRLLLE QAATVGCSVW WEVKTRKDRI KEEWDLALIN VLTVSACNAA
1501: AVWLLAPCRS YGNTFRFDLQ NTLQKLPNNV FEMSYPLREF DLQKRIHSLF YKAAELSILG VATGTLQGSL SNFLAAKKKN RVSVTVPSIT TNALGYGAFL
1601: GLYANMRYQL LCGFERAMSN HFDVIGVALF FGTAMRIMNV QLGERSRQVW LGVEADPLAQ SDDLLAKAYN RPSEEAAAAG KPASRWFISK NAIVSGLLGM
1701: KQQDSASDSP PPKARRKRIV RKKVAAPSAS
0101: DSRELVPKLS LKAHDGGVVA VELSRVSGSA PQLITIGADK TLAIWDTMTF KELRRIKPVP KLACHSVASW CHPRAPNLDI LTCVKDSHIW SIEHPTYSAL
0201: TRPLCELSSL VPPQVLATHR KLRVYCMVAH PLQPHLVATG TNVGIIVSEF DPRAIPSAAP LPALSGSREN SAVYILGREL KLLNFQISNT ANPSLGNNSA
0301: LSESGMAKGD SGEQLTVKQT KKQIVAPVPH DSYSVLSVSS SGKYVAVVWP DILYFSIYKV SDWTIVDSGS ARLLAWDTCR DRFAILESVL PQRMPIIPKG
0401: GSSRKAKEAA AAAAQAAAAA NAASSASVQV RILLDDGTSN ILMRSVGGRS EPVIGLHGGA LLGIGYRTSR RISPVAASAI STIQSMPLSG FGNSNVSSFS
0501: SYDDGSSQRS TESAPLNYQL YSWDNFEPVG GMLPQPEWTA WDQTVEYCAF AYQKYMVISS LRPQYRYLGD VAISHATGAV WHRRQLFVAT PTTIECVFVD
0601: AGVSEIDIET MKMKEEIKLK EAQARAVAEH GELALITVEG AQNAKQERIL LRPPMLQVVR LASFQNAPSV PPFLSLPRQS RGDGDDMDER RASEVAVGGG
0701: GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLSHPGIR CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR
0801: LEFDLAMQSN DLKRALHCLL TMSNSRDIGQ DGLGLDLSDI LSLTAEKKED VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG
0901: HELRGLALRL ANHGELTRLS GLINNLISIG LGRESAFAAA VLGDNALMEK AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEQ APSSKTDAAS
1001: AFLASLEDPK LTSLSDASTK PPIEILPPGM SSIFASISAP KKPLPTLKPQ EPTKPLAVEE PAKPLAIEAP PSSEQPQTES APETAADPES AAPETAAASE
1101: SAAPETAAVS ESEARETAAG SESAAPETAA VAETAEHLDK PVTETVSEPP VVEETPSEEK SVPSSTPNTE TALGATEVDS QTMPPPPPPE PVTTTVKPTE
1201: NAATGRQQSV VAPKPLSPLK PSLPIPRPIA TLPCKLRRSC SIRASSSSSL IDSVGDSVSG LERCLQLQFS GGSGTSSSGS ASPSAQMCPE MKGGKFGSVG
1301: AVTLEKGKLD MTQKKVESTP EIATGGGGGD IGKSVNFGGG DGGDDDGDDD DYFDEFDDDD DGDEGGLFRR RMFLAELFDR KFVDAVLNEW QKTMMDLPAG
1401: LRQAYEMGLV SSAQMVKFLA INARPTTTRF ISRALPQGLS RAFVGRMLAD PSFLYRLLLE QAATVGCSVW WEVKTRKDRI KEEWDLALIN VLTVSACNAA
1501: AVWLLAPCRS YGNTFRFDLQ NTLQKLPNNV FEMSYPLREF DLQKRIHSLF YKAAELSILG VATGTLQGSL SNFLAAKKKN RVSVTVPSIT TNALGYGAFL
1601: GLYANMRYQL LCGFERAMSN HFDVIGVALF FGTAMRIMNV QLGERSRQVW LGVEADPLAQ SDDLLAKAYN RPSEEAAAAG KPASRWFISK NAIVSGLLGM
1701: KQQDSASDSP PPKARRKRIV RKKVAAPSAS
0001: MLRARAFRQT NGKIVKIQVH PTHPWLVTAD DSDHVSVWNW EHRQVIYELK AGGVDERRLV GAKLEKLAEG ESDYKAKPTE AIRGGSVKQV KFYDDDVRYW
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KIH8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.