Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G123000.1 | Wheat | plastid | 99.06 | 98.88 |
| TraesCS5B01G110100.1 | Wheat | golgi | 98.31 | 98.5 |
| HORVU5Hr1G030040.1 | Barley | plastid | 95.87 | 93.25 |
| Os12t0283800-01 | Rice | extracellular, plastid | 39.02 | 88.14 |
| Zm00001d041036_P001 | Maize | cytosol | 55.53 | 86.05 |
| EES16982 | Sorghum | plastid | 83.86 | 83.09 |
| Zm00001d023791_P002 | Maize | plasma membrane | 80.3 | 79.7 |
| GSMUA_Achr2P05940_001 | Banana | cytosol, extracellular, plasma membrane | 54.03 | 65.75 |
| VIT_12s0034g01330.t01 | Wine grape | cytosol | 24.77 | 63.16 |
| TraesCS7A01G335500.1 | Wheat | plastid | 56.1 | 60.4 |
| VIT_12s0034g01370.t01 | Wine grape | plastid | 57.04 | 58.35 |
| KRH10440 | Soybean | endoplasmic reticulum, nucleus, plastid | 56.66 | 57.74 |
| KRH44019 | Soybean | mitochondrion, nucleus, plastid | 55.91 | 57.42 |
| Solyc10g045620.1.1 | Tomato | cytosol | 35.65 | 56.05 |
| CDX80466 | Canola | plastid | 55.35 | 55.98 |
| AT5G24690.1 | Thale cress | plastid | 54.41 | 55.66 |
| Bra009789.1-P | Field mustard | plastid | 55.16 | 55.58 |
| Bra036522.1-P | Field mustard | plastid | 54.03 | 55.38 |
| PGSC0003DMT400061143 | Potato | plastid | 54.22 | 55.15 |
| Solyc01g104270.2.1 | Tomato | plastid | 54.03 | 54.96 |
| CDX87117 | Canola | plastid | 53.85 | 54.56 |
| Solyc10g045630.1.1 | Tomato | plastid | 24.2 | 49.24 |
| TraesCS2A01G377800.1 | Wheat | plastid | 16.7 | 22.7 |
| TraesCS3A01G337100.1 | Wheat | golgi, plastid, unclear | 13.7 | 20.68 |
| TraesCS1A01G242600.1 | Wheat | plastid | 14.82 | 20.57 |
| TraesCS2A01G234300.1 | Wheat | mitochondrion, plastid | 15.38 | 19.25 |
| CDX88129 | Canola | cytosol | 54.78 | 16.88 |
| TraesCS1A01G298100.1 | Wheat | plastid | 21.01 | 15.3 |
| TraesCS3A01G347800.1 | Wheat | plastid | 20.45 | 15.14 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G110400.1 | EnsemblPlantsGene:TraesCS5A01G110400 | InterPro:RETICULATA-related | PANTHER:PTHR31038 | PANTHER:PTHR31038:SF2 | PFAM:PF11891 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:209688282..209704640
Molecular Weight (calculated)
58055.7 Da
IEP (calculated)
9.814
GRAVY (calculated)
-0.206
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLAAFHPN LPHAHGHPSH PNPTSGLLRL LPLCRRHRAP RRRGLGLAVS ACASSAASPS AAGRGDRSEA ASSLERCLAA SALSAAAPAA ASPRVPPAMK
101: GGKQYGAFGA VTLEKAKLDL SQRKKKIMPE LATGGGGGDI GKRIGHGGGD GGDDDGDDDD YFDDFDDGEE EDGGLFRRRI VIQELFNREF IDAVMQEWCK
201: TMISIPAGLR QAYEMGLVSS AQMVRFLSVF SRPTHTRSFS RALPGWLSRG LVGRTLADPS FPHKMAFEFL ATFASSVWWE MNIRKERFEQ EWDLAVVNAL
301: TASCCNLVVL GLLAPCRSYG STSRFDFQNA IEKLPNNIFE KSYPLREFDL QKRISAFLYK AAELSLVGVV AGSIQGGMSK ALSARKDGRL SVTLPNVSAN
401: ALGYGAFLGL YANLRYQLLC GLDQYMIKRF DVLGMAIFIG TTLRFMNIQI GESSRRAWLG EEADPQYSDR LLRAYTRPVE VTTAADQQES RWFISKDAVV
501: SGLGLLGIKQ GGPEAQLSKP RRKRVIRKKV ASG
101: GGKQYGAFGA VTLEKAKLDL SQRKKKIMPE LATGGGGGDI GKRIGHGGGD GGDDDGDDDD YFDDFDDGEE EDGGLFRRRI VIQELFNREF IDAVMQEWCK
201: TMISIPAGLR QAYEMGLVSS AQMVRFLSVF SRPTHTRSFS RALPGWLSRG LVGRTLADPS FPHKMAFEFL ATFASSVWWE MNIRKERFEQ EWDLAVVNAL
301: TASCCNLVVL GLLAPCRSYG STSRFDFQNA IEKLPNNIFE KSYPLREFDL QKRISAFLYK AAELSLVGVV AGSIQGGMSK ALSARKDGRL SVTLPNVSAN
401: ALGYGAFLGL YANLRYQLLC GLDQYMIKRF DVLGMAIFIG TTLRFMNIQI GESSRRAWLG EEADPQYSDR LLRAYTRPVE VTTAADQQES RWFISKDAVV
501: SGLGLLGIKQ GGPEAQLSKP RRKRVIRKKV ASG
001: MSHMVFQSVV APKPLSPLKP CLPIPRPLVT LPCKLRRGFV RASSSSFLVD DSVSGLERCL QLPSGVELGT SSSGSFSAST QMCPVMKGKF GSVGAVTLEK
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S
Arabidopsis Description
AT5g24690/MXC17_8 [Source:UniProtKB/TrEMBL;Acc:Q93W02]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.