Factsheet for HORVU5Hr1G030040.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G110100.1	Wheat	golgi	93.61	96.43
TraesCS5D01G123000.1	Wheat	plastid	93.43	95.88
TraesCS5A01G110400.1	Wheat	plastid	93.25	95.87
Os12t0283800-01	Rice	extracellular, plastid	37.41	86.86
Zm00001d041036_P001	Maize	cytosol	52.92	84.3
EES16982	Sorghum	plastid	81.02	82.53
Zm00001d023791_P002	Maize	plasma membrane	76.82	78.4
HORVU7Hr1G082560.2	Barley	mitochondrion	50.91	66.59
GSMUA_Achr2P05940_001	Banana	cytosol, extracellular, plasma membrane	51.82	64.84
VIT_12s0034g01330.t01	Wine grape	cytosol	23.72	62.2
VIT_12s0034g01370.t01	Wine grape	plastid	54.38	57.2
KRH10440	Soybean	endoplasmic reticulum, nucleus, plastid	54.56	57.17
KRH44019	Soybean	mitochondrion, nucleus, plastid	53.83	56.84
AT5G24690.1	Thale cress	plastid	52.55	55.28
CDX80466	Canola	plastid	52.92	55.03
Bra009789.1-P	Field mustard	plastid	52.92	54.82
Bra036522.1-P	Field mustard	plastid	52.01	54.81
PGSC0003DMT400061143	Potato	plastid	52.19	54.58
Solyc01g104270.2.1	Tomato	plastid	52.19	54.58
CDX87117	Canola	plastid	52.37	54.56
Solyc10g045620.1.1	Tomato	cytosol	33.58	54.28
Solyc10g045630.1.1	Tomato	plastid	23.72	49.62
HORVU2Hr1G090260.1	Barley	plastid	16.06	21.57
HORVU3Hr1G109880.1	Barley	plastid	14.78	20.82
HORVU2Hr1G049760.6	Barley	cytosol, peroxisome	13.5	20.79
HORVU0Hr1G000510.2	Barley	cytosol	8.21	19.74
CDX88129	Canola	cytosol	52.74	16.71
HORVU3Hr1G079620.1	Barley	mitochondrion, plastid	12.59	16.63
HORVU3Hr1G088220.12	Barley	mitochondrion, plastid	19.71	14.75
HORVU5Hr1G020100.2	Barley	cytosol	4.74	11.06
HORVU1Hr1G070330.11	Barley	cytosol	19.89	9.08

Protein Annotations

EnsemblPlants:HORVU5Hr1G030040.1	EnsemblPlantsGene:HORVU5Hr1G030040	InterPro:RETICULATA-related	PANTHER:PTHR31038	PANTHER:PTHR31038:SF2	PFAM:PF11891
SEG:seg	UniParc:UPI000B478C8B	UniProt:A0A287QSW8	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:184424429..184440528

Molecular Weight (calculated)

59428.4 Da

IEP (calculated)

10.105

GRAVY (calculated)

-0.241

Length

548 amino acids

Sequence
(BLAST)

001: PWRASTATPH PSLSRMASLA AFHPNLPHAH GHPSHPSPTS GLLRLLPSRC RHRAPRRRGL GLAVSACASS AASPSAAGRG DRSEAASSLE RCLAASAPGA
101: AAPAAAPPRV PPAMKGGKQY GAFGAVTLEK AKLDLSQRKK KIMPELATGG GGGDIGKRIG HGGGDGGDDD GDDDDYFDDF DDGEEEDGGL FRRRIVIQEL
201: FNKEFIDAVM QEWCKTMISL PAGLRQAYEM GLVSSAQMVR FLSVFSRPTH TRSFSRALPG WLSRGLVGRT LADPSFPHKM AFEFLATFAS SVWWEMNIRK
301: ERFEKEWDLA VVNALTASCC NLVVLGLLAP CRSYGSTSRF DFQNAIEKLP NNIFEKSYPL REFDLQKRMS AFLYKAAELS LVGVVAGSIQ GGLSKALSAR
401: KGSRLSVTLP NVSTNALGYG AFLGLYANLR YQLLCGLDQY TIKRFDVLGM AIFIGTTLRL MNIQIGESSR RAWLGEEADP QCSDRLLRAY TRPVEVTTPA
501: DQQESRWFIS KDAVVSGLGL LGIKQGGHGA QLSKPRRKKV IRKKVASG

Best Arabidopsis Sequence Match ( AT5G24690.1 )
(BLAST)

001: MSHMVFQSVV APKPLSPLKP CLPIPRPLVT LPCKLRRGFV RASSSSFLVD DSVSGLERCL QLPSGVELGT SSSGSFSAST QMCPVMKGKF GSVGAVTLEK
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S

Arabidopsis Description

AT5g24690/MXC17_8 [Source:UniProtKB/TrEMBL;Acc:Q93W02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.