Factsheet for Solyc10g045630.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g104270.2.1	Tomato	plastid	71.37	35.69
VIT_12s0034g01370.t01	Wine grape	plastid	64.12	32.25
CDX87117	Canola	plastid	61.45	30.61
Bra036522.1-P	Field mustard	plastid	60.69	30.58
Bra009789.1-P	Field mustard	plastid	61.45	30.43
CDX80466	Canola	plastid	61.07	30.36
AT5G24690.1	Thale cress	plastid	60.31	30.33
KRH44019	Soybean	mitochondrion, nucleus, plastid	58.78	29.67
KRH10440	Soybean	endoplasmic reticulum, nucleus, plastid	58.78	29.45
GSMUA_Achr2P05940_001	Banana	cytosol, extracellular, plasma membrane	48.47	29.0
Zm00001d041036_P001	Maize	cytosol	34.35	26.16
EES16982	Sorghum	plastid	51.15	24.91
TraesCS7B01G247100.1	Wheat	plastid	47.33	24.9
TraesCS7A01G335500.1	Wheat	plastid	46.95	24.85
HORVU7Hr1G082560.2	Barley	mitochondrion	39.69	24.82
TraesCS7D01G343200.1	Wheat	plastid	46.95	24.7
TraesCS5B01G110100.1	Wheat	golgi	49.62	24.44
TraesCS5A01G110400.1	Wheat	plastid	49.24	24.2
TraesCS5D01G123000.1	Wheat	plastid	49.24	24.16
Zm00001d023791_P002	Maize	plasma membrane	48.85	23.84
HORVU5Hr1G030040.1	Barley	plastid	49.62	23.72
Solyc01g087750.2.1	Tomato	nucleus, plastid	13.36	9.21
CDX88129	Canola	cytosol	59.92	9.08
Solyc11g065490.1.1	Tomato	plastid	12.21	7.75
Solyc10g045620.1.1	Tomato	cytosol	9.54	7.37
Solyc09g011340.2.1	Tomato	plastid	10.31	6.31
Solyc06g050620.2.1	Tomato	mitochondrion	16.79	5.89
Os05t0474600-02	Rice	cytosol	9.54	5.76
Solyc11g066740.1.1	Tomato	plastid	8.4	5.74
Solyc09g031940.1.1	Tomato	plastid	6.87	5.04
Solyc10g074880.1.1	Tomato	plastid	6.11	4.46
VIT_12s0034g01330.t01	Wine grape	cytosol	1.53	1.91
Os12t0283800-01	Rice	extracellular, plastid	1.15	1.27
Os05t0474500-01	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc10g045630.1.1	EnsemblPlantsGene:Solyc10g045630.1	PANTHER:PTHR31038	PANTHER:PTHR31038:SF2	SEG:seg	UniParc:UPI0002769A2E
UniProt:K4CZS8	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr10:-:34895014..34901932

Molecular Weight (calculated)

28246.8 Da

IEP (calculated)

5.859

GRAVY (calculated)

-0.187

Length

262 amino acids

Sequence
(BLAST)

001: MSHSVFQTAQ IMPINTQLLP TSTKPLFPAI VIRRPVLRVG GTLRKINVIR ASTSPVIDGD AIAGLERCFQ ATPSVDPPSS SSSTSMSAPV MKGGGKYGAF
101: GAVTLEKSKL NLTQKQTQSS PEISTGGGGG NMGKNLNHGG GDGGDDDGDD DDYFDDFDDG DEGDEGGLFR RRMILQELFD RKFVDAVLNE WQKTMMDLPA
201: GLRQAYEMGL VSSAQMVKFL AINARPTTAR FISRSLPQGL SRAFIGRIIF FSLIIVVEFM GN

Best Arabidopsis Sequence Match ( AT5G24690.1 )
(BLAST)

001: MSHMVFQSVV APKPLSPLKP CLPIPRPLVT LPCKLRRGFV RASSSSFLVD DSVSGLERCL QLPSGVELGT SSSGSFSAST QMCPVMKGKF GSVGAVTLEK
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S

Arabidopsis Description

AT5g24690/MXC17_8 [Source:UniProtKB/TrEMBL;Acc:Q93W02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.