Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0826900-01 | Rice | cytosol, endoplasmic reticulum, plastid | 74.65 | 43.37 |
| Os05t0388600-01 | Rice | plasma membrane | 26.5 | 30.42 |
| Os01t0957200-01 | Rice | plastid | 25.35 | 28.28 |
| Os04t0524400-01 | Rice | plastid | 19.12 | 20.8 |
| Os01t0812900-01 | Rice | plastid | 16.13 | 20.11 |
| Os12t0283800-01 | Rice | extracellular, plastid | 10.14 | 18.64 |
| HORVU7Hr1G082560.2 | Barley | mitochondrion | 16.82 | 17.42 |
| Os07t0240300-01 | Rice | plastid | 17.51 | 17.16 |
| GSMUA_Achr2P05940_001 | Banana | cytosol, extracellular, plasma membrane | 17.28 | 17.12 |
| Solyc10g045620.1.1 | Tomato | cytosol | 12.9 | 16.52 |
| KRH10440 | Soybean | endoplasmic reticulum, nucleus, plastid | 19.12 | 15.87 |
| KRH44019 | Soybean | mitochondrion, nucleus, plastid | 18.89 | 15.8 |
| VIT_12s0034g01330.t01 | Wine grape | cytosol | 7.6 | 15.79 |
| Bra036522.1-P | Field mustard | plastid | 18.43 | 15.38 |
| AT5G24690.1 | Thale cress | plastid | 18.43 | 15.36 |
| CDX87117 | Canola | plastid | 18.43 | 15.21 |
| CDX80466 | Canola | plastid | 18.43 | 15.18 |
| Bra009789.1-P | Field mustard | plastid | 18.2 | 14.93 |
| Solyc01g104270.2.1 | Tomato | plastid | 17.97 | 14.89 |
| TraesCS7A01G335500.1 | Wheat | plastid | 16.82 | 14.75 |
| PGSC0003DMT400061143 | Potato | plastid | 17.74 | 14.69 |
| TraesCS7B01G247100.1 | Wheat | plastid | 16.82 | 14.66 |
| TraesCS7D01G343200.1 | Wheat | plastid | 16.82 | 14.66 |
| VIT_12s0034g01370.t01 | Wine grape | plastid | 17.51 | 14.59 |
| Os03t0390900-01 | Rice | plastid | 5.99 | 12.5 |
| Solyc10g045630.1.1 | Tomato | plastid | 5.76 | 9.54 |
| CDX88129 | Canola | cytosol | 18.2 | 4.57 |
| Os05t0474500-01 | Rice | cytosol | 1.15 | 0.98 |
Protein Annotations
| EnsemblPlants:Os05t0474600-02 | EnsemblPlantsGene:Os05g0474600 | EntrezGene:4339090 | InterPro:RETICULATA-related | PANTHER:PTHR31620 | PANTHER:PTHR31620:SF6 |
| PFAM:PF11891 | ProteinID:BAS94517.1 | SEG:seg | SUPFAM:SSF159501 | UniParc:UPI000393BC31 | UniProt:A0A0P0WNP3 |
| MapMan:35.1 | : | : | : | : | : |
Description
Similar to Aldose reductase-related protein (EC 1.1.1.21). (Os05t0474600-01);Similar to predicted protein. (Os05t0474600-02);Similar to Aldose reductase-related protein (EC 1.1.1.21). (Os05t0474600-03)
Coordinates
chr5:+:23293934..23297160
Molecular Weight (calculated)
47511.8 Da
IEP (calculated)
7.431
GRAVY (calculated)
-0.140
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: IILKELNGGD TSRMLIVITG ASHVIYGSRG IGVPARVSKK MPKKDQVVVL LDPERQSIRR EGEIPVADFL WYSAAKPCSR NCFDRAEIAR VMNAAGRRPE
101: ALPQDLQKGI DLGVVSPEIL QNFFDLEKYP VMSELIHRFQ GFRERLLADP KFLQRLAIEE AISITTTLLA QYERRKGRFF EEIDYVLTDT IRGSVVDFFT
201: VWLPAPTISV LSYADDGSGE SLEFVKGLLG SLPDNAFQKN VLGQNWNMKQ RVAAVLVGGL KLASVGFISS VGAGASSDLL YAARGVLKSS VNAEAGRKRS
301: PIWKSAAVYS CFLGTSANLR YQIIAGLVEH RLGESLATSY NQPLLASLLS FVARTVNSYW GTQQWVDLAR YTGLQKTKEV PPVEATAPPA ETSQLATPPA
401: ETSQLATPPA ETSQLEDGRT EVQNLDDNSN QSSG
101: ALPQDLQKGI DLGVVSPEIL QNFFDLEKYP VMSELIHRFQ GFRERLLADP KFLQRLAIEE AISITTTLLA QYERRKGRFF EEIDYVLTDT IRGSVVDFFT
201: VWLPAPTISV LSYADDGSGE SLEFVKGLLG SLPDNAFQKN VLGQNWNMKQ RVAAVLVGGL KLASVGFISS VGAGASSDLL YAARGVLKSS VNAEAGRKRS
301: PIWKSAAVYS CFLGTSANLR YQIIAGLVEH RLGESLATSY NQPLLASLLS FVARTVNSYW GTQQWVDLAR YTGLQKTKEV PPVEATAPPA ETSQLATPPA
401: ETSQLATPPA ETSQLEDGRT EVQNLDDNSN QSSG
001: MKLTTNDLFA SQPLFHCPCS SSSRPRRRRF YGLHFPINLT SEKNNSLSIV ALSDSDLPSR TAFSRRAFLL APPLLVSAAS LFLKPSVSLA SEESSSATVT
101: SPAESAAPPP PPATTTPSPP PPVNKEETIT SRIYDATAIG EPMAMGKDKK KVWEKLLNAR VVYLGEAEQV PTKDDKELEL EIVRNLRKRC VESERQISVA
201: LEAFPLDLQD QLNQYMDKRM DGETLKSYVT HWPAQRWQEY EPLLSYCRDN SVRLIACGTP LKVLRTVQAE GIRGLSKSER KLYTPPAGSG FISGFSSFSR
301: RSTFDMSLPT QIVPFGPSSY LSAQARVVED HTMSQVILQA VADGGGTGLL LVVTGASHVE YGSRGTGLPA RISRKFPKKN QVVVLLDPER QFLRREGETP
401: VADFLWYSAA RPCSRNCFDR AEIARVMNAA GRRRDALPPD IQNGLDLGLV SPEVLQNLFD LEQYPLISEL TQRFQGFRER LLADPKFLNR LAIEEAISIT
501: TTLIAQYEKR KENFFEEIDY VITDTVRGSV VDFFTVWLPA PTLSFLSYAD ETTGPDSIDA LRGLLGSIPD NAFQKSLAGR EWNLNLRIAS VIVGGLKLAG
601: VGVVSSFAAV GASNALNIAR KVIKPELVVA EKPKRSPLLK TAMVYGGFLG TSANLRYQII AGLIEHRLSD ELSSQPLLVN AISFVVRTLN SYFGTQQWID
701: LARSTGLQTQ KSIPASKEIS EALEEPTVEC DTTTEEESID KLNNQ
101: SPAESAAPPP PPATTTPSPP PPVNKEETIT SRIYDATAIG EPMAMGKDKK KVWEKLLNAR VVYLGEAEQV PTKDDKELEL EIVRNLRKRC VESERQISVA
201: LEAFPLDLQD QLNQYMDKRM DGETLKSYVT HWPAQRWQEY EPLLSYCRDN SVRLIACGTP LKVLRTVQAE GIRGLSKSER KLYTPPAGSG FISGFSSFSR
301: RSTFDMSLPT QIVPFGPSSY LSAQARVVED HTMSQVILQA VADGGGTGLL LVVTGASHVE YGSRGTGLPA RISRKFPKKN QVVVLLDPER QFLRREGETP
401: VADFLWYSAA RPCSRNCFDR AEIARVMNAA GRRRDALPPD IQNGLDLGLV SPEVLQNLFD LEQYPLISEL TQRFQGFRER LLADPKFLNR LAIEEAISIT
501: TTLIAQYEKR KENFFEEIDY VITDTVRGSV VDFFTVWLPA PTLSFLSYAD ETTGPDSIDA LRGLLGSIPD NAFQKSLAGR EWNLNLRIAS VIVGGLKLAG
601: VGVVSSFAAV GASNALNIAR KVIKPELVVA EKPKRSPLLK TAMVYGGFLG TSANLRYQII AGLIEHRLSD ELSSQPLLVN AISFVVRTLN SYFGTQQWID
701: LARSTGLQTQ KSIPASKEIS EALEEPTVEC DTTTEEESID KLNNQ
Arabidopsis Description
RER6Protein RETICULATA-RELATED 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.