Factsheet for HORVU7Hr1G082560.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G343200.1	Wheat	plastid	97.14	81.73
TraesCS7A01G335500.1	Wheat	plastid	96.18	81.41
TraesCS7B01G247100.1	Wheat	plastid	96.42	81.12
GSMUA_Achr2P05940_001	Banana	cytosol, extracellular, plasma membrane	62.29	59.59
VIT_12s0034g01330.t01	Wine grape	cytosol	27.68	55.5
Solyc10g045620.1.1	Tomato	cytosol	41.77	51.62
HORVU5Hr1G030040.1	Barley	plastid	66.59	50.91
KRH44019	Soybean	mitochondrion, nucleus, plastid	61.34	49.52
KRH10440	Soybean	endoplasmic reticulum, nucleus, plastid	61.34	49.14
VIT_12s0034g01370.t01	Wine grape	plastid	61.1	49.14
Bra009789.1-P	Field mustard	plastid	61.58	48.77
CDX80466	Canola	plastid	61.34	48.77
AT5G24690.1	Thale cress	plastid	60.62	48.75
Bra036522.1-P	Field mustard	plastid	60.14	48.46
PGSC0003DMT400061143	Potato	plastid	60.14	48.09
CDX87117	Canola	plastid	60.14	47.91
Solyc01g104270.2.1	Tomato	plastid	59.67	47.71
Solyc10g045630.1.1	Tomato	plastid	24.82	39.69
HORVU0Hr1G000510.2	Barley	cytosol	11.46	21.05
HORVU2Hr1G049760.6	Barley	cytosol, peroxisome	17.18	20.22
HORVU3Hr1G109880.1	Barley	plastid	18.38	19.79
HORVU2Hr1G090260.1	Barley	plastid	17.9	18.38
Os05t0474600-02	Rice	cytosol	17.42	16.82
HORVU3Hr1G079620.1	Barley	mitochondrion, plastid	15.99	16.14
CDX88129	Canola	cytosol	61.58	14.91
HORVU3Hr1G088220.12	Barley	mitochondrion, plastid	20.53	11.75
HORVU5Hr1G020100.2	Barley	cytosol	5.25	9.36
HORVU1Hr1G070330.11	Barley	cytosol	18.38	6.42
Os05t0474500-01	Rice	cytosol	0.48	0.39

Protein Annotations

EnsemblPlants:HORVU7Hr1G082560.2	EnsemblPlantsGene:HORVU7Hr1G082560	InterPro:RETICULATA-related	PANTHER:PTHR31038	PANTHER:PTHR31038:SF2	PFAM:PF11891
SEG:seg	UniParc:UPI000296BC25	UniProt:M0Z914	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr7H:+:496446537..496453729

Molecular Weight (calculated)

46646.1 Da

IEP (calculated)

9.468

GRAVY (calculated)

-0.257

Length

419 amino acids

Sequence
(BLAST)

001: MKGGRQRGSF GAATLQKAKL DLSQRRLKGV QPELATGGGG GDNGKRIGYG GGNSGDDDGD DDDYFEDSDD GDEESGFFRR RIIIQELFKR EFVDAVLQEW
101: YKTMSNLPAG LRQAHEMGLV SSAQMVQYLS VFGRPTKARY FSRAFPDFFS RGLVGRMLAD PSFLHKMTFE LLATAGTSVW WEMKNRKERF QEEWDLVFLN
201: VVTATVCNLA VFCSLAPCRS YMIQKLPNNI FEKSYPMRQF GLLGRTQSLF SKAAELCLGG LIVGSIQGGL SNVLSAGRET RLSMTVPSIS NNALSYGAYY
301: GLYANLRYQF LCGLDRSMAN HFDVLGVTIF FGTAMRLMNI QIGELSRRAW LGEGADLLNS DNLLRTYNGP AAELAIDQQA EWFMSKNAIV SGLELLGIKY
401: GAPKDASPKL RRKRIVRKK

Best Arabidopsis Sequence Match ( AT5G24690.1 )
(BLAST)

001: MSHMVFQSVV APKPLSPLKP CLPIPRPLVT LPCKLRRGFV RASSSSFLVD DSVSGLERCL QLPSGVELGT SSSGSFSAST QMCPVMKGKF GSVGAVTLEK
101: GKLDMTQKIS ETSPEIATGG GGGNIGKSIN NGGGDGGDDN GDDDDYFDEF DDGDEGDDDG LFRRRMFLAE IFDRKFVDAV LNEWQKTMMD LPAGLRQAYE
201: MGLVSSAQMV KFLAINARPT TTRMISRALP QGLSRAFVGR MLADPAFLYK LLLEQAATVG CSVWWEVKNR KNRLKEEWDL ALINVLTVSA CNAAAVWLLA
301: PCRSYGNTFR FDLQNTLQKL PNNLFEMSYP LREFDLQKRF HSLFYKAAEL SILGLAAGTL QGSLSNVLAG KKKNRVSVTV PSISTNALGY GAFLGIYANL
401: RYQLLCGFER GVSSHFDVIG VALFFGTALR IMNVQLGEKS RQVWLGVEAD PLAQSDDLLA KAYNRPSEEA VAKPSSKWFI SKNAIVSGLL GKKQEDSVSD
501: SPPPKARRKR IVRKKVAASA S

Arabidopsis Description

AT5g24690/MXC17_8 [Source:UniProtKB/TrEMBL;Acc:Q93W02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.