Factsheet for HORVU2Hr1G049760.6

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G261500.1	Wheat	golgi, unclear	94.66	78.74
TraesCS2A01G234300.1	Wheat	mitochondrion, plastid	93.82	78.4
TraesCS2D01G241700.1	Wheat	golgi, unclear	93.82	78.04
Os07t0240300-01	Rice	plastid	83.43	67.04
EER98239	Sorghum	plastid	80.9	66.06
Zm00001d019249_P002	Maize	mitochondrion, plastid	80.9	64.86
VIT_08s0007g01250.t01	Wine grape	cytosol	62.36	59.52
CDY59488	Canola	plastid	62.92	53.46
CDY07766	Canola	plastid	62.08	53.38
Bra000024.1-P	Field mustard	plastid	63.76	53.29
CDX91387	Canola	plastid	62.92	52.83
CDX74930	Canola	plastid	62.36	52.48
Bra005154.1-P	Field mustard	plastid	62.36	52.48
KRH49190	Soybean	endoplasmic reticulum	65.17	52.37
KRH00055	Soybean	plastid	65.45	52.36
AT2G37860.4	Thale cress	plastid	61.52	50.69
HORVU2Hr1G090260.1	Barley	plastid	56.18	49.02
HORVU0Hr1G000510.2	Barley	cytosol	16.29	25.44
HORVU3Hr1G109880.1	Barley	plastid	25.0	22.88
HORVU3Hr1G079620.1	Barley	mitochondrion, plastid	22.19	19.04
HORVU7Hr1G082560.2	Barley	mitochondrion	20.22	17.18
HORVU5Hr1G030040.1	Barley	plastid	20.79	13.5
HORVU3Hr1G088220.12	Barley	mitochondrion, plastid	21.91	10.66
HORVU5Hr1G020100.2	Barley	cytosol	4.49	6.81
HORVU1Hr1G070330.11	Barley	cytosol	20.22	6.0

Protein Annotations

MapMan:35.1	UniProt:A0A287HZB0	GO:GO:0000302	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009648	GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0048366
EnsemblPlantsGene:HORVU2Hr1G049760	EnsemblPlants:HORVU2Hr1G049760.6	PFAM:PF11891	PANTHER:PTHR31038	PANTHER:PTHR31038:SF5	InterPro:RETICULATA-related
TMHMM:TMhelix	UniParc:UPI000B46BCBE	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:284615181..284651069

Molecular Weight (calculated)

37728.2 Da

IEP (calculated)

4.927

GRAVY (calculated)

0.089

Length

356 amino acids

Sequence
(BLAST)

001: VAASAEVVGA VTQPTVLQED GAEVADVSGS GGSGKFRPGG GGGGDGDNGG GGDGGDDHNE RDDELGPILS FEQVVQEVEK QGVSLSSLPA DMIEAAKSMG
101: IQKLLLLRYL DMQASAWPMG PAIRSFGFLR NRMLVDPTFL FKIGTEIVID TCCATFAEVQ KRGDEFWSEF ELYAADMLVG VVVNVALVGM LAPYARFRGG
201: STSAGLLGRV RHAYDALPSS VFEAERPGYS FSIQQRLGSY LLKVGFLYGA VGFSCGLVGQ GIANLIMTAK RSVKKSENDV PVPPLLKTSV LWGAFLGVSS
301: NTRYQVINGL ERLVEASPLG KRVPAASLAF TVSVRFANNV YGGMQFVDWA RMSGCQ

Best Arabidopsis Sequence Match ( AT2G37860.1 )
(BLAST)

001: MAGCAMNLQF SSVVKVRNEI SSFGICNRDF VFRDLAKAMK VPVLRIRGGS GRQRSRLFVV NMSQSPIEPQ SGGFAATEQI KGEGDNSILG KDNVRNLGTD
101: QLENLDIDGN VGDGFNGSDG NGGGGGGGNG GEGDGEGEDY EEKEFGPILK FEEVMKETEA RGATLPSDML EAAKNYGIRK VLLLRYLDLQ SSAGLLGFAI
201: RSWAMLRNRM LADPSFLFKI GAEIVIDSCC ATVAEVQKRG KDFWAEFELY VADLLVGTVV NIALVGMLAP YVRFGQPSAS PGFLGRMVFA YNALPSSVFE
301: AERPGCRFSA QQRLATYFYK GIMYGAVGFG CGIVGQGIAN LIMTAKR

Arabidopsis Description

REProtein RETICULATA, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFK5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.