Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G341400.1 | Wheat | plastid | 97.09 | 97.22 |
| TraesCS3A01G347800.1 | Wheat | plastid | 96.67 | 96.81 |
| HORVU3Hr1G088220.12 | Barley | mitochondrion, plastid | 94.59 | 93.17 |
| EES03820 | Sorghum | mitochondrion | 81.97 | 80.52 |
| Zm00001d043023_P002 | Maize | plastid | 82.11 | 80.22 |
| Os01t0826900-01 | Rice | cytosol, endoplasmic reticulum, plastid | 80.72 | 77.91 |
| GSMUA_Achr6P35670_001 | Banana | plastid | 65.74 | 66.85 |
| TraesCS1B01G307600.1 | Wheat | plastid | 67.82 | 66.44 |
| GSMUA_AchrUn_... | Banana | plastid | 68.79 | 66.13 |
| VIT_13s0067g02090.t01 | Wine grape | mitochondrion, plastid | 62.14 | 59.81 |
| AT2G40400.1 | Thale cress | plastid | 59.92 | 58.78 |
| Solyc06g050620.2.1 | Tomato | mitochondrion | 60.61 | 58.5 |
| PGSC0003DMT400061517 | Potato | mitochondrion | 60.33 | 58.23 |
| KRG97671 | Soybean | plastid | 60.19 | 58.1 |
| CDX67635 | Canola | plastid | 59.78 | 58.01 |
| AT3G56140.1 | Thale cress | plastid | 59.92 | 57.99 |
| Bra003229.1-P | Field mustard | plastid | 59.5 | 57.89 |
| CDX93185 | Canola | plastid | 59.08 | 57.88 |
| CDY31998 | Canola | plastid | 59.64 | 57.87 |
| KRH31203 | Soybean | plastid | 59.92 | 57.75 |
| CDY52926 | Canola | plastid | 58.67 | 56.93 |
| Bra017008.1-P | Field mustard | plastid | 58.67 | 56.93 |
| TraesCS1B01G254100.1 | Wheat | unclear | 17.2 | 32.46 |
| TraesCS2B01G394800.1 | Wheat | golgi, plastid | 14.15 | 25.95 |
| TraesCS3B01G368200.1 | Wheat | golgi, plastid, unclear | 12.48 | 25.79 |
| TraesCS5B01G110100.1 | Wheat | golgi | 15.12 | 20.49 |
| TraesCS7B01G247100.1 | Wheat | plastid | 14.15 | 20.48 |
| TraesCS2B01G261500.1 | Wheat | golgi, unclear | 11.93 | 20.09 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G379700.2 | EnsemblPlantsGene:TraesCS3B01G379700 | Gene3D:3.40.50.11550 | InterPro:Cofac_haem-bd_dom | InterPro:RETICULATA-related | PANTHER:PTHR31620 |
| PANTHER:PTHR31620:SF6 | PFAM:PF04187 | PFAM:PF11891 | SEG:seg | SUPFAM:SSF159501 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3B:-:597467755..597473387
Molecular Weight (calculated)
78420.9 Da
IEP (calculated)
6.155
GRAVY (calculated)
-0.115
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPHAPSRHL GAAKFKPLLP AKPPLSPASS SRGTLCAAAA SRRDFLLLVP SLAAASTALQ YLPLAASAAD DEKPAPTPPP VPAAAPAPTP AAESEGEALS
101: RMYDATVIGE PQAVGKDARG RVWEKLMAAR VVYLGEAELV PDRDDRVLEL EIVRKLAARC ADAGRTLSLS LEAFPCDLQE QLNQFMDGRI DGNNLRLYTS
201: QWAPERWQEY EPLLNYCRDN GIKLIACGTP LEVVRTVQAE GIKGLSKEQR KLYAPPAGSG FISGFTSISG RSLIDKTSSS RVSPFGPSSY LSAQARVVDD
301: YTMSQIIMKE ISTGDPSGML VVVTGASHVM YGSRGIGVPA RISKKMQKKK QVVILLDPER QGIRREGEIP VADLLWYSAA KPCSRNCFDR AEIARVMNAA
401: GRRREALPQD IQKGIDLGVV SPEILQNFFD LEKYPVVDEL IHRFQGFRER LLADPQFLNR LAIEEGISIT TAVLAQYEKR KGRFFEEIDY VLTDTIRGSV
501: VDFFTVWLPA PTISLLSIAD NGSGESLELV RGLLGSLPDN AFQKGIVGQN WDMNQRFASV LVGGLKLAGV GFVSSIGAGV ASDVLYAARR FLSPTSIEAE
601: RPRAPIWKAA SVYSGFLGTS ANLRYQVIAG LVEHRLGEYL VSYYNQPFLA NVLSFVARII NSYFGTQQWI DLARSTGIQT SEEEPPSPGT LISSEIPVLE
701: CGTAEVPSTD DINKNQSGEQ T
101: RMYDATVIGE PQAVGKDARG RVWEKLMAAR VVYLGEAELV PDRDDRVLEL EIVRKLAARC ADAGRTLSLS LEAFPCDLQE QLNQFMDGRI DGNNLRLYTS
201: QWAPERWQEY EPLLNYCRDN GIKLIACGTP LEVVRTVQAE GIKGLSKEQR KLYAPPAGSG FISGFTSISG RSLIDKTSSS RVSPFGPSSY LSAQARVVDD
301: YTMSQIIMKE ISTGDPSGML VVVTGASHVM YGSRGIGVPA RISKKMQKKK QVVILLDPER QGIRREGEIP VADLLWYSAA KPCSRNCFDR AEIARVMNAA
401: GRRREALPQD IQKGIDLGVV SPEILQNFFD LEKYPVVDEL IHRFQGFRER LLADPQFLNR LAIEEGISIT TAVLAQYEKR KGRFFEEIDY VLTDTIRGSV
501: VDFFTVWLPA PTISLLSIAD NGSGESLELV RGLLGSLPDN AFQKGIVGQN WDMNQRFASV LVGGLKLAGV GFVSSIGAGV ASDVLYAARR FLSPTSIEAE
601: RPRAPIWKAA SVYSGFLGTS ANLRYQVIAG LVEHRLGEYL VSYYNQPFLA NVLSFVARII NSYFGTQQWI DLARSTGIQT SEEEPPSPGT LISSEIPVLE
701: CGTAEVPSTD DINKNQSGEQ T
001: MKPTTNGGLL ASQSSSSFSF PRFRGQLPII FSANNNQKKK NLPNPNVVTL CLHSHSNVSS SQIAVTRRAI LVAPPLLAAA ASLFLSISSA ASAETSAESV
101: ALPPVATAPP PPPVEKEEAI TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR CIESDRQLSL ALEAFPLDLQ
201: EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL
301: TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA
401: ARPCSRNCFD RAEIARVMNA AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN RLAIEEAISI TTTLVAQYEK
501: RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA
601: VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT
701: QKSVTTSNQI PEVASQSTVE YSTTEEASMD DLKNQ
101: ALPPVATAPP PPPVEKEEAI TSRIYDASVL GEPMAVGKDK KRVWEKLLNA RIVYLGEAEQ VPTRDDKVLE LEIVRNLRKR CIESDRQLSL ALEAFPLDLQ
201: EQLNQYMDKR MDGEVLKSYV SHWPVQRWQE YEPLLSYCRD NGVKLIACGT PLKVLRTVQA EGIRGLSESE RKLYTPPAGS GFISGFTSFS RSSSLNMNPL
301: TQIVPFGPSS YLSAQARVVE DHTMSQVIVQ AVADGGGTGM LVVVTGANHV EYGSRGTGLP ARISRKIPKK SQLVVLLDPE RQFLRKEGES PVADFLWYSA
401: ARPCSRNCFD RAEIARVMNA AGRRRDALPQ DIQKGLDLGL VSPEILQNFF DLEQYPLISE LTQRFQGFRE RLLADPKFLN RLAIEEAISI TTTLVAQYEK
501: RKENFFEELD YVITDSVRAS VVDFFTVWLP APTLSFISYA DETIGPNSID ALRGLLGSIP DNAFQKSLGG QEWTLSLRIA SVIIGGLKLA GVGVVSSFAA
601: VGSSNALYAI RKFIKPELGV GEQAKRSPML KTALVYGGYL GTSSNIRYQI IAGLIEHRIS DELSSQPLLV NMISFVVRVA NSYFGTQQWI DLARSTGLQT
701: QKSVTTSNQI PEVASQSTVE YSTTEEASMD DLKNQ
Arabidopsis Description
RER5Protein RETICULATA-RELATED 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SIY5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.