Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0012g00630.t01 | Wine grape | nucleus | 63.14 | 53.85 |
| Solyc08g077290.1.1 | Tomato | unclear | 39.61 | 31.66 |
| KRH59540 | Soybean | endoplasmic reticulum, nucleus | 39.22 | 31.65 |
| CDY38980 | Canola | nucleus | 35.69 | 30.74 |
| AT5G45420.2 | Thale cress | nucleus | 36.86 | 30.42 |
| Bra025078.1-P | Field mustard | nucleus | 35.29 | 30.1 |
| CDY39426 | Canola | nucleus | 34.51 | 29.53 |
| PGSC0003DMT400062221 | Potato | nucleus | 36.86 | 29.47 |
| TraesCS7A01G299800.1 | Wheat | nucleus | 32.16 | 26.37 |
| TraesCS7D01G294900.1 | Wheat | nucleus | 31.76 | 26.13 |
| HORVU7Hr1G070730.1 | Barley | nucleus | 31.76 | 26.05 |
| TraesCS7B01G187400.1 | Wheat | nucleus | 31.76 | 26.05 |
| KXG24493 | Sorghum | nucleus, plastid | 31.76 | 25.47 |
| Zm00001d024538_P001 | Maize | plasma membrane | 31.37 | 25.24 |
| Os08t0159000-01 | Rice | nucleus | 31.76 | 24.92 |
| GSMUA_Achr1P06330_001 | Banana | nucleus | 19.61 | 19.76 |
| VIT_01s0011g00790.t01 | Wine grape | nucleus | 22.35 | 8.78 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | ProteinID:CBI35235 | ProteinID:CBI35235.3 | UniProt:D7TXL0 | EMBL:FN596257 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Homeobox-like_sf | InterPro:IPR017877 | InterPro:Myb-like_dom | PFAM:PF00249 | PFscan:PS50090 |
| PANTHER:PTHR43999 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TMHMM:TMhelix | UniParc:UPI0001BE441F |
| ArrayExpress:VIT_13s0106g00370 | EnsemblPlantsGene:VIT_13s0106g00370 | EnsemblPlants:VIT_13s0106g00370.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr13:+:9992537..9993493
Molecular Weight (calculated)
29055.5 Da
IEP (calculated)
9.783
GRAVY (calculated)
-0.269
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPPPSNRRP RLRKVETATF RSPVATSVEG DNGLARVEKR SEVAAEERDW VDGDVEILKK QLLKHPVGMP GRWEAVAEAF QGRHGVESVI RKAKSLGEKK
101: LSDSDSFNRF LKDRKPVDKR VEDAMAMENG EKKEGWSSGE DIALLNALKA FPKDVPMRWE KIAAAVPGRS KAACMKRFSE LKKDFRNPKL LLRSNCVEEV
201: IVLIYRMNIN VCFLLFQLFI MICLSTQTEI LVVISPTILC YLSSFYFEIR KILYC
101: LSDSDSFNRF LKDRKPVDKR VEDAMAMENG EKKEGWSSGE DIALLNALKA FPKDVPMRWE KIAAAVPGRS KAACMKRFSE LKKDFRNPKL LLRSNCVEEV
201: IVLIYRMNIN VCFLLFQLFI MICLSTQTEI LVVISPTILC YLSSFYFEIR KILYC
001: MDFFDEDRPR FVFQSRPSSS HTAEEEEEAR IPNKLFISIS VSISLIILSL SFFYFESEPA KSLLLWLSLS FLVGPFAPSS LTGGKIRVGY GQILEPEQIH
101: DESSTDNERE SRRKSVNKRS KGSTKSDNPP ENASAVTEVS RKVVIPQSKE SGSVNETKDW TAEEIEILKK QLIKHPAGKP GRWETVASAF GGRYKTENVI
201: KKAKEIGEKK IYESDDYAQF LKNRKASDPR LVDENEENSG AGGDAEGTKE IWSNGEDIAL LNALKAFPKE AAMRWEKIAA AVPGKSKAAC MKRVTELKKG
301: FRSSKTPAN
101: DESSTDNERE SRRKSVNKRS KGSTKSDNPP ENASAVTEVS RKVVIPQSKE SGSVNETKDW TAEEIEILKK QLIKHPAGKP GRWETVASAF GGRYKTENVI
201: KKAKEIGEKK IYESDDYAQF LKNRKASDPR LVDENEENSG AGGDAEGTKE IWSNGEDIAL LNALKAFPKE AAMRWEKIAA AVPGKSKAAC MKRVTELKKG
301: FRSSKTPAN
Arabidopsis Description
MAMYBTranscription factor MAMYB [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.