Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92823 | Soybean | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 45.23 | 69.23 |
| KRH33973 | Soybean | nucleus | 65.33 | 65.33 |
| PGSC0003DMT400063395 | Potato | nucleus | 64.32 | 65.31 |
| Solyc03g115580.2.1 | Tomato | nucleus | 63.07 | 64.36 |
| Bra039453.1-P | Field mustard | nucleus | 61.31 | 61.31 |
| AT3G05210.1 | Thale cress | nucleus | 63.07 | 61.22 |
| CDY05146 | Canola | nucleus | 60.8 | 61.11 |
| CDY27786 | Canola | nucleus | 60.8 | 60.35 |
| Os10t0518900-01 | Rice | nucleus | 57.29 | 58.91 |
| GSMUA_Achr11P... | Banana | nucleus | 59.55 | 58.52 |
| EER91361 | Sorghum | nucleus | 57.79 | 57.93 |
| TraesCS1A01G182000.1 | Wheat | nucleus | 55.53 | 56.96 |
| Zm00001d032439_P002 | Maize | nucleus | 56.78 | 56.93 |
| TraesCS1D01G185100.1 | Wheat | nucleus | 55.28 | 56.7 |
| HORVU1Hr1G048250.1 | Barley | nucleus | 55.53 | 56.67 |
| TraesCS1B01G199000.1 | Wheat | nucleus | 55.28 | 56.56 |
Protein Annotations
Description
No Description!
Coordinates
chr14:+:2828944..2836930
Molecular Weight (calculated)
44770.7 Da
IEP (calculated)
7.815
GRAVY (calculated)
-0.683
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKEEEEKQR ERDDEKKNKS SIVIKIPSYQ EVLESSQSKT TSSLFTPSPS FSQAFSFVKS SQSYTPPPPA TPPPPPPPSS RQVEQLEAPS SSSSSPSLSR
101: SAQSRNAILV SHRQKGNPLL KHIRNVRWDF ADIVCDYLLG QNSCALYLSL RYHLLHPDYL YYRIRELQKN FKLRVVLCHV DVEDVIKPLL EVTRTALLHD
201: CTLLCAWSLE ECGRYLETIK VYENKSADII QGQTDTDYLS RLTHALTTVR HVNKTDVVTL GSTFGSLSHI MDASMEDLAR CPGIGERKVK RLYDTFHEPF
301: KRVVPSCPAV PENPVHNNAE PSSVNEVVEV ENDVEDASKR RKKEPELTVK SALSAAFAQY SEKIGKRNNR PQGKKHEEKG HAPETKAENK PSDEGAAS
101: SAQSRNAILV SHRQKGNPLL KHIRNVRWDF ADIVCDYLLG QNSCALYLSL RYHLLHPDYL YYRIRELQKN FKLRVVLCHV DVEDVIKPLL EVTRTALLHD
201: CTLLCAWSLE ECGRYLETIK VYENKSADII QGQTDTDYLS RLTHALTTVR HVNKTDVVTL GSTFGSLSHI MDASMEDLAR CPGIGERKVK RLYDTFHEPF
301: KRVVPSCPAV PENPVHNNAE PSSVNEVVEV ENDVEDASKR RKKEPELTVK SALSAAFAQY SEKIGKRNNR PQGKKHEEKG HAPETKAENK PSDEGAAS
001: MANEDDDGEK SRSLHQQIAR KPKTQIVIGV PSYQEVLESS QTKSTPPSLF KPSQSFSQAF AFVKSSDVYS PPPPSSAAAS SSQPSGASQV PHSSSQTHQT
101: DGASSSSTPV ATGSVPSNTT QNRNAILVSH RQKGNPLLKH IRNVKWVFSD IIPDYVLGQN SCALYLSLRY HLLHPDYLYF RIRELQKNFK LSVVLCHVDV
201: EDTVKPLLEV TKTALLHDCT LLCAWSMTEC ARYLETIKVY ENKPADLIQG QMDTDYLSRL NHSLTSIRHV NKSDVVTLGS TFGSLAHIID ASMEDLARCP
301: GIGERKVKRL YDTFHEPFKR ATSSYPSVVE PPIPEAPVEK DVNSEEPVEE DEDFVEDSRK RKKKEPEPEK TVKTALSAVF ARYSDRLSKK KEKQKEKDTT
401: TASDAETHQN
101: DGASSSSTPV ATGSVPSNTT QNRNAILVSH RQKGNPLLKH IRNVKWVFSD IIPDYVLGQN SCALYLSLRY HLLHPDYLYF RIRELQKNFK LSVVLCHVDV
201: EDTVKPLLEV TKTALLHDCT LLCAWSMTEC ARYLETIKVY ENKPADLIQG QMDTDYLSRL NHSLTSIRHV NKSDVVTLGS TFGSLAHIID ASMEDLARCP
301: GIGERKVKRL YDTFHEPFKR ATSSYPSVVE PPIPEAPVEK DVNSEEPVEE DEDFVEDSRK RKKKEPEPEK TVKTALSAVF ARYSDRLSKK KEKQKEKDTT
401: TASDAETHQN
Arabidopsis Description
ERCC1DNA excision repair protein ERCC-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA98]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.