Factsheet for Zm00001d026194_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000439_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	61.24	62.2
Zm00001d017689_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	53.1	53.94
GSMUA_Achr4P19040_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	48.84	50.81
GSMUA_Achr4P27330_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	48.06	48.82
HORVU7Hr1G044670.7	Barley	plasma membrane	28.68	48.68
VIT_02s0012g01630.t01	Wine grape	peroxisome, plasma membrane, vacuole	46.12	46.85
GSMUA_Achr9P23350_001	Banana	mitochondrion, plasma membrane	44.19	46.72
Bra012640.1-P	Field mustard	cytosol	37.98	46.67
CDX90446	Canola	cytosol	37.98	46.67
GSMUA_Achr4P12280_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	42.64	45.08
KRH39560	Soybean	plasma membrane	44.57	44.57
Bra040182.1-P	Field mustard	plasma membrane	44.19	44.36
CDY54781	Canola	plasma membrane	43.8	43.97
CDX78801	Canola	plasma membrane	43.8	43.97
CDY01491	Canola	golgi, peroxisome, plasma membrane	39.53	43.22
AT4G17790.1	Thale cress	plasma membrane	43.8	42.8
PGSC0003DMT400045191	Potato	plasma membrane	45.74	42.75
Solyc08g076670.2.1	Tomato	plasma membrane	45.74	42.75
KRH74398	Soybean	golgi, peroxisome, plasma membrane	44.57	39.93
Zm00001d033664_P001	Maize	peroxisome	34.5	32.13
CDY01492	Canola	plasma membrane	9.69	15.15

Protein Annotations

EnsemblPlants:Zm00001d026194_P003	EnsemblPlants:Zm00001d026194_T003	EnsemblPlantsGene:Zm00001d026194	EntrezGene:100273321	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR43220	PANTHER:PTHR43220:SF6	ProteinID:AQK45825.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI000843227C	UniProt:A0A1D6JDC2	MapMan:35.1	:	:	:

Description

SNARE associated Golgi protein family

Coordinates

chr10:-:140686477..140688969

Molecular Weight (calculated)

28782.0 Da

IEP (calculated)

9.265

GRAVY (calculated)

0.087

Length

258 amino acids

Sequence
(BLAST)

001: MGRDERFPVW EAALGAGVAA AFAAGLVGVY LSMPDSDYSF LKLPRNLQEL QILTGHLENY TSDYTLQVLV GYCAVYIFMQ TFMIPGTIFM SLLAGALFGQ
101: LRGVALVVFA ATAGASSCYF LSKMIGKPLV FTLWPDKLSF FQRQGDPNIA KYLHQLGFTD SRCPLPHILT GNSHWPYPSF LCDCQGWNRS WRINFAKRPL
201: RHPVDSAAIP DRCCFSHTSI VGQGRGTRKT IRNGCRRVVI TKAPSTCTYQ HAAMQWLH

Best Arabidopsis Sequence Match ( AT1G71940.1 )
(BLAST)

001: MAPTRILTRD EELGVISDDD DSPSGKRSKL DRFPLSRWEL AVSLGVFLVF SSGLCCIYMT MPAAEFGKLK LPRSLADLRL LKDNLANYAN EYPAQFVLGY
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE

Arabidopsis Description

SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:F4IBM1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.